RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 TMEM59LQ9UK28 342 aa6.8□□□□□ -1.32
CLIP4-212ENST00000493551 MROH1Q8NDA8 1641 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 CNTNAP4Q9C0A0 1308 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 CEP162Q5TB80 1403 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 ICMTO60725 284 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 HPXP02790 462 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 FGD1P98174 961 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 PHLDB3Q6NSJ2 640 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 BAHD1Q8TBE0 780 aaPredicted RBP6.79□□□□□ -1.32
CLIP4-212ENST00000493551 UBE2FQ969M7 185 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 RRP7BPQ9NSQ0 103 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 MSH6P52701 1360 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 JCADQ9P266 1359 aa6.79□□□□□ -1.32
CLIP4-212ENST00000493551 KCNA6P17658 529 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 ZNF746Q6NUN9 644 aaPredicted RBP6.78□□□□□ -1.32
CLIP4-212ENST00000493551 MPRIPQ6WCQ1 1025 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 ZNF507Q8TCN5 953 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 TMEM2Q9UHN6 1383 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 ARHGAP23Q9P227 1491 aa6.78□□□□□ -1.32
CLIP4-212ENST00000493551 SLIT1O75093 1534 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 DNAJC25-GNG10A0A024R161 153 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 SEMA7AO75326 666 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 TRIM37O94972 964 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 HK2P52789 917 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 ERVFC1P60507 584 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 DLG4P78352 724 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 RALGPS1Q5JS13 557 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 TCERG1LQ5VWI1 586 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 IRF2BP1Q8IU81 584 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 EPS8L3Q8TE67 593 aaKnown RBP6.77□□□□□ -1.33
CLIP4-212ENST00000493551 MIPEPQ99797 713 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 ZSWIM5Q9P217 1185 aa6.77□□□□□ -1.33
CLIP4-212ENST00000493551 COL16A1Q07092 1604 aaPredicted RBP6.76□□□□□ -1.33
CLIP4-212ENST00000493551 H3BRB1 525 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 RBAK-RBAKDNI3L0D1 243 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 PPP1R15AO75807 674 aaPredicted RBP6.76□□□□□ -1.33
CLIP4-212ENST00000493551 IDI1Q13907 227 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 TMPRSS7Q7RTY8 843 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 MARCH10Q8NA82 808 aaPredicted RBP6.76□□□□□ -1.33
CLIP4-212ENST00000493551 CXorf38Q8TB03 319 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 MCOLN1Q9GZU1 580 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 TUT1Q9H6E5 874 aaKnown RBP6.76□□□□□ -1.33
CLIP4-212ENST00000493551 AKAP2Q9Y2D5 859 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 SAMM50Q9Y512 469 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 ARHGEF5Q12774 1597 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 PRDM15P57071 1507 aaPredicted RBP6.76□□□□□ -1.33
CLIP4-212ENST00000493551 EFCAB6Q5THR3 1501 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 AFF2P51816 1311 aa6.76□□□□□ -1.33
CLIP4-212ENST00000493551 LRRC9Q6ZRR7 1453 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 KIF15Q9NS87 1388 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 ZNF772Q68DY9 489 aaPredicted RBP6.75□□□□□ -1.33
CLIP4-212ENST00000493551 MFSD2AQ8NA29 543 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 DDX17Q92841 729 aaKnown RBP6.75□□□□□ -1.33
CLIP4-212ENST00000493551 ELMO3Q96BJ8 720 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 BORCS6Q96GS4 357 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 COX4I2Q96KJ9 171 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 C8orf37Q96NL8 207 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 RNF32Q9H0A6 362 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 SLC6A17Q9H1V8 727 aa6.75□□□□□ -1.33
CLIP4-212ENST00000493551 CNOT6Q9ULM6 557 aaKnown RBP6.75□□□□□ -1.33
CLIP4-212ENST00000493551 GPR182O15218 404 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 PEX10O60683 326 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 CBX7O95931 251 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 KIR3DL1P43629 444 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 KRTAP10-2P60368 255 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 ZNF385BQ569K4 471 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 NLRP2Q9NX02 1062 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 PCDHA4Q9UN74 947 aa6.74□□□□□ -1.33
CLIP4-212ENST00000493551 EIF2AK4Q9P2K8 1649 aaKnown RBP6.73□□□□□ -1.33
CLIP4-212ENST00000493551 RFXAPO00287 272 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 ESR1P03372 595 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 CAP2P40123 477 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 ARHGAP4P98171 946 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 SLBPQ14493 270 aaKnown RBP eCLIP6.73□□□□□ -1.33
CLIP4-212ENST00000493551 SCARA3Q6AZY7 606 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 PRRT2Q7Z6L0 340 aaPredicted RBP6.73□□□□□ -1.33
CLIP4-212ENST00000493551 TMEM151BQ8IW70 566 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 GRIN3AQ8TCU5 1115 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 NECAB3Q96P71 396 aaPredicted RBP6.73□□□□□ -1.33
CLIP4-212ENST00000493551 BCO2Q9BYV7 579 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 KDM5AP29375 1690 aaKnown RBP6.73□□□□□ -1.33
CLIP4-212ENST00000493551 RGS12O14924 1447 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 MAST1Q9Y2H9 1570 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 SPATA31A6Q5VVP1 1343 aa6.73□□□□□ -1.33
CLIP4-212ENST00000493551 NKTRP30414 1462 aaKnown RBP6.73□□□□□ -1.33
CLIP4-212ENST00000493551 ADGRB3O60242 1522 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 DUOX2Q9NRD8 1548 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 TET3O43151 1660 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 MYOCOSA0A1B0GUC4 107 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 IGHA2P01877 340 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 ATF3P18847 181 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 CYP7A1P22680 504 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 LETMD1Q6P1Q0 360 aa6.72□□□□□ -1.33
CLIP4-212ENST00000493551 LILRA2Q8N149 483 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms