RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 CAPN11Q9UMQ6 739 aa7.56□□□□□ -1.2
EWSR1-220ENST00000493426 MAST3O60307 1309 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 LAMA4Q16363 1823 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 GOLGA8BA8MQT2 603 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 MYO1FO00160 1098 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 PDE2AO00408 941 aaPredicted RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 LIN7AO14910 233 aaPredicted RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 KRT86O43790 486 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 HSF2BPO75031 334 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 LCA5LO95447 670 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 ATP1A1P05023 1023 aaKnown RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 GSTA1P08263 222 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 PAEPP09466 180 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 MYBL2P10244 700 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 TCP1P17987 556 aaKnown RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 KRT9P35527 623 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 TIE1P35590 1138 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 CYLC1P35663 651 aaPredicted RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 MDH1P40925 334 aaKnown RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 CDR1P51861 262 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 COPB1P53618 953 aaKnown RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 NEXNQ0ZGT2 675 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 TFCP2Q12800 502 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 PDAP1Q13442 181 aaKnown RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 TTMPQ5BVD1 217 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 NLRP14Q86W24 1093 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 CREG2Q8IUH2 290 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 APLFQ8IW19 511 aaPredicted RBP7.55□□□□□ -1.2
EWSR1-220ENST00000493426 PARP9Q8IXQ6 854 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 CCDC13Q8IYE1 715 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 JAKMIP2Q96AA8 810 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 ANKRD27Q96NW4 1050 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 PLEKHA4Q9H4M7 779 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 GDF3Q9NR23 364 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 KCNG1Q9UIX4 513 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 SNX12Q9UMY4 172 aa7.55□□□□□ -1.2
EWSR1-220ENST00000493426 UBN2Q6ZU65 1347 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 FOXN1O15353 648 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 FOXP2O15409 715 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 POLR2DO15514 142 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 RNMTO43148 476 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 CIAO1O76071 339 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ABL1P00519 1130 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 IFNAR1P17181 557 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 SCP2P22307 547 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 LIFRP42702 1097 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 TOB1P50616 345 aaPredicted RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 FOSBP53539 338 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 CASP7P55210 303 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 HERVK_113P62684 666 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ADCY2Q08462 1091 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 DPYDQ12882 1025 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 TRIM29Q14134 588 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 KRT31Q15323 416 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 TTF1Q15361 905 aaPredicted RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ALX1Q15699 326 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 KIAA0753Q2KHM9 967 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 EPHA10Q5JZY3 1008 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 CYB5D1Q6P9G0 228 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ARHGAP27Q6ZUM4 889 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 KIAA1328Q86T90 577 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 FAM228AQ86W67 206 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 NOSTRINQ8IVI9 506 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 TRIM58Q8NG06 486 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 MYCBPAPQ8TBZ2 947 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 NOC3LQ8WTT2 800 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 IP6K1Q92551 441 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 N4BP2L2Q92802 583 aaPredicted RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 TATDN2Q93075 761 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 FERMT2Q96AC1 680 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ARL8AQ96BM9 186 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 SLF1Q9BQI6 1058 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 EHD4Q9H223 541 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 EBF2Q9HAK2 575 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 CD248Q9HCU0 757 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 STRN4Q9NRL3 753 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ZNHIT6Q9NWK9 470 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 DDX20Q9UHI6 824 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 TSKSQ9UJT2 592 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 PCDHB8Q9UN66 801 aa7.54□□□□□ -1.2
EWSR1-220ENST00000493426 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 DDX60Q8IY21 1712 aaKnown RBP7.54□□□□□ -1.2
EWSR1-220ENST00000493426 SYNRGQ9UMZ2 1314 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 LGALS16A8MUM7 142 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 BHMG1C9JSJ3 638 aaPredicted RBP7.53□□□□□ -1.2
EWSR1-220ENST00000493426 RNF225M0QZC1 329 aaPredicted RBP7.53□□□□□ -1.2
EWSR1-220ENST00000493426 N4BP3O15049 544 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 PJA2O43164 708 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 KCNQ3O43525 872 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 FGAP02671 866 aa7.53□□□□□ -1.2
EWSR1-220ENST00000493426 TFRCP02786 760 aaKnown RBP7.53□□□□□ -1.2
EWSR1-220ENST00000493426 MMP1P03956 469 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms