RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TRIM43BA6NCK2 446 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 SMIM22K7EJ46 135 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 APBB1O00213 710 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 SLC25A27O95847 323 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 TRIM43Q96BQ3 446 aaPredicted RBP25.9■■□□□ 1.74
PFDN4-205ENST00000493356 CCDC17Q96LX7 622 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 ADAMTS5Q9UNA0 930 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 CDH23Q9H251 3354 aa25.9■■□□□ 1.74
PFDN4-205ENST00000493356 MBD4O95243 580 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 IFIT2P09913 472 aaKnown RBP25.89■■□□□ 1.74
PFDN4-205ENST00000493356 TLE2Q04725 743 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 SLFNL1Q499Z3 407 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 SEMA6BQ9H3T3 888 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 XPNPEP3Q9NQH7 507 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 NRBP1Q9UHY1 535 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 PHF24Q9UPV7 400 aa25.89■■□□□ 1.74
PFDN4-205ENST00000493356 PRUNE2Q8WUY3 3088 aa25.89■■□□□ 1.73
PFDN4-205ENST00000493356 CYP2D7A0A087X1C5 515 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 ADD2P35612 726 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 CDK8P49336 464 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 SMAD3P84022 425 aaKnown RBP25.88■■□□□ 1.73
PFDN4-205ENST00000493356 HNRNPUQ00839 825 aaKnown RBP eCLIP25.88■■□□□ 1.73
PFDN4-205ENST00000493356 C12orf60Q5U649 245 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 MMP19Q99542 508 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 FBXO28Q9NVF7 368 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 PAG1Q9NWQ8 432 aa25.88■■□□□ 1.73
PFDN4-205ENST00000493356 RARBP10826 455 aa25.87■■□□□ 1.73
PFDN4-205ENST00000493356 PGK2P07205 417 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 EEF2P13639 858 aaKnown RBP25.86■■□□□ 1.73
PFDN4-205ENST00000493356 C16orf86Q6ZW13 317 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 RIOX2Q8IUF8 465 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 TINF2Q9BSI4 451 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 BCL11AQ9H165 835 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 TTYH1Q9H313 450 aaPredicted RBP25.86■■□□□ 1.73
PFDN4-205ENST00000493356 TACC3Q9Y6A5 838 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 MYH7P12883 1935 aa25.86■■□□□ 1.73
PFDN4-205ENST00000493356 ROBO3Q96MS0 1386 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 USP17L12C9JPN9 530 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 USP17L21D6R901 530 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 PGK1P00558 417 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 ITGB8P26012 769 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 ZNF792Q3KQV3 632 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 RNF180Q86T96 592 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 MAFAQ8NHW3 353 aaPredicted RBP25.85■■□□□ 1.73
PFDN4-205ENST00000493356 BOLA2Q9H3K6 86 aa25.85■■□□□ 1.73
PFDN4-205ENST00000493356 DIS3Q9Y2L1 958 aaKnown RBP25.85■■□□□ 1.73
PFDN4-205ENST00000493356 VWA5AO00534 786 aa25.84■■□□□ 1.73
PFDN4-205ENST00000493356 CLTBP09497 229 aa25.84■■□□□ 1.73
PFDN4-205ENST00000493356 TAL1P17542 331 aaPredicted RBP25.84■■□□□ 1.73
PFDN4-205ENST00000493356 KCTD2Q14681 263 aa25.84■■□□□ 1.73
PFDN4-205ENST00000493356 RPAP2Q8IXW5 612 aaPredicted RBP25.84■■□□□ 1.73
PFDN4-205ENST00000493356 AMOTL1Q8IY63 956 aa25.84■■□□□ 1.73
PFDN4-205ENST00000493356 KANSL2Q9H9L4 492 aa25.84■■□□□ 1.73
PFDN4-205ENST00000493356 ZNF214Q9UL59 606 aaPredicted RBP25.84■■□□□ 1.73
PFDN4-205ENST00000493356 PPP1R9AQ9ULJ8 1098 aa25.84■■□□□ 1.73
PFDN4-205ENST00000493356 CHGBP05060 677 aa25.83■■□□□ 1.73
PFDN4-205ENST00000493356 ATP5JP18859 108 aa25.83■■□□□ 1.73
PFDN4-205ENST00000493356 STAT3P40763 770 aa25.83■■□□□ 1.73
PFDN4-205ENST00000493356 SIRT2Q8IXJ6 389 aa25.83■■□□□ 1.73
PFDN4-205ENST00000493356 MYLIPQ8WY64 445 aa25.83■■□□□ 1.73
PFDN4-205ENST00000493356 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.83■■□□□ 1.73
PFDN4-205ENST00000493356 A0A1W2PQ45 241 aaPredicted RBP25.82■■□□□ 1.72
PFDN4-205ENST00000493356 A0A1W2PQY0 241 aa25.82■■□□□ 1.72
PFDN4-205ENST00000493356 HMMRO75330 724 aa25.82■■□□□ 1.72
PFDN4-205ENST00000493356 ZNF865P0CJ78 1059 aaPredicted RBP25.82■■□□□ 1.72
PFDN4-205ENST00000493356 EPHB4P54760 987 aa25.82■■□□□ 1.72
PFDN4-205ENST00000493356 REPS2Q8NFH8 660 aa25.82■■□□□ 1.72
PFDN4-205ENST00000493356 GOPCQ9HD26 462 aa25.82■■□□□ 1.72
PFDN4-205ENST00000493356 ZBED9Q6R2W3 1325 aa25.82■■□□□ 1.72
PFDN4-205ENST00000493356 GREB1LQ9C091 1923 aaPredicted RBP25.81■■□□□ 1.72
PFDN4-205ENST00000493356 KIAA0355O15063 1070 aa25.81■■□□□ 1.72
PFDN4-205ENST00000493356 RAB11FIP3O75154 756 aa25.81■■□□□ 1.72
PFDN4-205ENST00000493356 AKR1A1P14550 325 aa25.81■■□□□ 1.72
PFDN4-205ENST00000493356 FAM83BQ5T0W9 1011 aa25.81■■□□□ 1.72
PFDN4-205ENST00000493356 LENG1Q96BZ8 264 aaPredicted RBP25.81■■□□□ 1.72
PFDN4-205ENST00000493356 DDRGK1Q96HY6 314 aa25.81■■□□□ 1.72
PFDN4-205ENST00000493356 RNPC3Q96LT9 517 aaKnown RBP25.81■■□□□ 1.72
PFDN4-205ENST00000493356 HAUS7Q99871 368 aa25.81■■□□□ 1.72
PFDN4-205ENST00000493356 SPTBN5Q9NRC6 3674 aaKnown RBP25.81■■□□□ 1.72
PFDN4-205ENST00000493356 PQBP1O60828 265 aaKnown RBP25.8■■□□□ 1.72
PFDN4-205ENST00000493356 ADAMTS4O75173 837 aa25.8■■□□□ 1.72
PFDN4-205ENST00000493356 RAG1P15918 1043 aa25.8■■□□□ 1.72
PFDN4-205ENST00000493356 COPB2P35606 906 aa25.8■■□□□ 1.72
PFDN4-205ENST00000493356 UBE3CQ15386 1083 aa25.8■■□□□ 1.72
PFDN4-205ENST00000493356 SLC4A4Q9Y6R1 1079 aa25.8■■□□□ 1.72
PFDN4-205ENST00000493356 RAD21O60216 631 aa25.79■■□□□ 1.72
PFDN4-205ENST00000493356 CTR9Q6PD62 1173 aa25.79■■□□□ 1.72
PFDN4-205ENST00000493356 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.79■■□□□ 1.72
PFDN4-205ENST00000493356 CNPY2Q9Y2B0 182 aa25.79■■□□□ 1.72
PFDN4-205ENST00000493356 FOSL2P15408 326 aa25.78■■□□□ 1.72
PFDN4-205ENST00000493356 ZBTB40Q9NUA8 1239 aa25.78■■□□□ 1.72
PFDN4-205ENST00000493356 TTC28Q96AY4 2481 aa25.78■■□□□ 1.72
PFDN4-205ENST00000493356 TMEM265A0A087WTH1 108 aa25.77■■□□□ 1.72
PFDN4-205ENST00000493356 MS4A1P11836 297 aa25.77■■□□□ 1.72
PFDN4-205ENST00000493356 FPGSQ05932 587 aa25.77■■□□□ 1.72
PFDN4-205ENST00000493356 ANKRD33Q7Z3H0 272 aa25.77■■□□□ 1.72
PFDN4-205ENST00000493356 TSEN34Q9BSV6 310 aaKnown RBP25.77■■□□□ 1.72
PFDN4-205ENST00000493356 PUS7LQ9H0K6 701 aaKnown RBP25.77■■□□□ 1.72
PFDN4-205ENST00000493356 TMEM39AQ9NV64 488 aa25.77■■□□□ 1.72
PFDN4-205ENST00000493356 ACLYP53396 1101 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms