RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PPP2R5EQ16537 467 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 ARHGAP44Q17R89 818 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 KRT26Q7Z3Y9 468 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 NEK8Q86SG6 692 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 PNMA1Q8ND90 353 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 MRRFQ96E11 262 aaKnown RBP17.99■□□□□ 0.47
BRAT1-206ENST00000493232 LSM14BQ9BX40 385 aaKnown RBP17.99■□□□□ 0.47
BRAT1-206ENST00000493232 OR52Z1P0C646 297 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 PFKFB1P16118 471 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 RSRC1Q96IZ7 334 aaKnown RBP17.99■□□□□ 0.47
BRAT1-206ENST00000493232 PNOCQ13519 176 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 CACNA2D3Q8IZS8 1091 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 ARHGAP24Q8N264 748 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 MIS12Q9H081 205 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 MYO1AQ9UBC5 1043 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
BRAT1-206ENST00000493232 TYW1BQ6NUM6 668 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
BRAT1-206ENST00000493232 PCDHA12Q9UN75 941 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 TNKSO95271 1327 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 SCG2P13521 617 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 P3H4Q92791 437 aa17.99■□□□□ 0.47
BRAT1-206ENST00000493232 MED23Q9ULK4 1368 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-206ENST00000493232 GADD45BO75293 160 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-206ENST00000493232 PPFIA1Q13136 1202 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 FAM102BQ5T8I3 360 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 OR8K1Q8NGG5 319 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 CNKSR1Q969H4 720 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 LMBRD1Q9NUN5 540 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 KIAA1468Q9P260 1216 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 CERKLQ49MI3 558 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-206ENST00000493232 CCDC62Q6P9F0 684 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 STAMQ92783 540 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 KCNJ18B7U540 433 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-206ENST00000493232 KCNJ12Q14500 433 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 SDCCAG8Q86SQ7 713 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-206ENST00000493232 TRIM58Q8NG06 486 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 GSDMBQ8TAX9 411 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 LIG4P49917 911 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 MAP7Q14244 749 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 PRR16Q569H4 304 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 C2CD5Q86YS7 1000 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 NLRC4Q9NPP4 1024 aa17.98■□□□□ 0.47
BRAT1-206ENST00000493232 SEMA3EO15041 775 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 TNNC2P02585 160 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 GYG1P46976 350 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 GKAP1Q5VSY0 366 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 CASC4Q6P4E1 433 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 TEKT3Q9BXF9 490 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 METTL14Q9HCE5 456 aaKnown RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 KLRF2D3W0D1 207 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ALAS1P13196 640 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 KIF11P52732 1056 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 YARSP54577 528 aaKnown RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 UBE3CQ15386 1083 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ARMCX3Q9UH62 379 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 MAP3K15Q6ZN16 1313 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 A0A0D9SFI3 127 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 FOSP01100 380 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 KRT15P19012 456 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ICA1Q05084 483 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 LONRF3Q496Y0 759 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 U2AF1L4Q8WU68 220 aaKnown RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ATP2A3Q93084 1043 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 EAF2Q96CJ1 260 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ADPGKQ9BRR6 497 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 SLC12A2P55011 1212 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 MORC3Q14149 939 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 ZSWIM6Q9HCJ5 1215 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 COL4A3BPQ9Y5P4 624 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 TACC3Q9Y6A5 838 aa17.97■□□□□ 0.47
BRAT1-206ENST00000493232 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 GTPBP6O43824 516 aaPredicted RBP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 CMA1P23946 247 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 BTDP43251 543 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 CYP2J2P51589 502 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 LONRF2Q1L5Z9 754 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 GBP6Q6ZN66 633 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 MAGEF1Q9HAY2 307 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 C1orf112Q9NSG2 853 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 XPO4Q9C0E2 1151 aaKnown RBP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 RPUSD2Q8IZ73 545 aaKnown RBP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 LARSQ9P2J5 1176 aaKnown RBP17.96■□□□□ 0.47
BRAT1-206ENST00000493232 PPP2R5DQ14738 602 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 WHAMMP3Q1A5X7 153 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 XKR9Q5GH70 373 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 DENND2CQ68D51 928 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 VSIG1Q86XK7 387 aa17.96■□□□□ 0.47
BRAT1-206ENST00000493232 GRK7Q8WTQ7 553 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms