RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 EMILIN3Q9NT22 766 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 ZSWIM5Q9P217 1185 aa15.76■□□□□ 0.11
MSH6-208ENST00000493177 ERICH2A1L162 156 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L15C9J2P7 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L13C9JLJ4 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L11C9JVI0 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L18D6R9N7 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L22D6RA61 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L17D6RBQ6 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L19D6RCP7 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L20D6RJB6 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 HOXA7P31268 230 aaPredicted RBP15.75■□□□□ 0.11
MSH6-208ENST00000493177 GRK4P32298 578 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 HERVK_113P62684 666 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 UBXN2AP68543 259 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 USP17L24Q0WX57 530 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 COL9A3Q14050 684 aaPredicted RBP15.75■□□□□ 0.11
MSH6-208ENST00000493177 SART3Q15020 963 aaKnown RBP15.75■□□□□ 0.11
MSH6-208ENST00000493177 ACER1Q8TDN7 264 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 ZNF333Q96JL9 665 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
MSH6-208ENST00000493177 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 SH2D4AQ9H788 454 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 DOCK3Q8IZD9 2030 aa15.75■□□□□ 0.11
MSH6-208ENST00000493177 IFIT3O14879 490 aaKnown RBP15.74■□□□□ 0.11
MSH6-208ENST00000493177 RAD21O60216 631 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 ST18O60284 1047 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 ANTXR2P58335 489 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 ICA1Q05084 483 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 Q6ZUG5 572 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 SLAIN1Q8ND83 568 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 NEDD1Q8NHV4 660 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 C12orf42Q96LP6 360 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 GABRQQ9UN88 632 aa15.74■□□□□ 0.11
MSH6-208ENST00000493177 MYH4Q9Y623 1939 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 VCAM1P19320 739 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 FLT3LGP49771 235 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 EXOSC10Q01780 885 aaKnown RBP15.73■□□□□ 0.11
MSH6-208ENST00000493177 CCDC178Q5BJE1 867 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 TMEM67Q5HYA8 995 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
MSH6-208ENST00000493177 GPRC5AQ8NFJ5 357 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 TMEM87BQ96K49 555 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
MSH6-208ENST00000493177 TANGO6Q9C0B7 1094 aa15.73■□□□□ 0.11
MSH6-208ENST00000493177 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
MSH6-208ENST00000493177 TNKSO95271 1327 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 ADCY3O60266 1144 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 NMT2O60551 498 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 GUCY1A2P33402 732 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 WTAPQ15007 396 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 WDR78Q5VTH9 848 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
MSH6-208ENST00000493177 NFXL1Q6ZNB6 911 aa15.72■□□□□ 0.11
MSH6-208ENST00000493177 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
MSH6-208ENST00000493177 SH2B2O14492 632 aaPredicted RBP15.71■□□□□ 0.11
MSH6-208ENST00000493177 ERVK-9P63128 1117 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 ERVK-24P63145 666 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 CCNA1P78396 465 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 ANKRD1Q15327 319 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 CLEC10AQ8IUN9 316 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 CEP95Q96GE4 821 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 GPHNQ9NQX3 736 aaPredicted RBP15.71■□□□□ 0.11
MSH6-208ENST00000493177 TCP11L1Q9NUJ3 509 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 MORF4L1Q9UBU8 362 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 STX8Q9UNK0 236 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 PLIN4Q96Q06 1357 aa15.71■□□□□ 0.11
MSH6-208ENST00000493177 ELNP15502 786 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 EN2P19622 333 aaPredicted RBP15.7■□□□□ 0.1
MSH6-208ENST00000493177 MAPK4P31152 587 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 AK2P54819 239 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 PPP4R3BQ5MIZ7 849 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
MSH6-208ENST00000493177 CATSPERGQ6ZRH7 1159 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 BRF1Q92994 677 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 TTC14Q96N46 770 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
MSH6-208ENST00000493177 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.7■□□□□ 0.1
MSH6-208ENST00000493177 RNF208Q9H0X6 261 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 KANSL2Q9H9L4 492 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 IL17RBQ9NRM6 502 aa15.7■□□□□ 0.1
MSH6-208ENST00000493177 A0A1W2PRG0 241 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 CCDC69A6NI79 296 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 PEX10O60683 326 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 ANP32AP39687 249 aaKnown RBP15.69■□□□□ 0.1
MSH6-208ENST00000493177 IRF5Q13568 498 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 MTFR1Q15390 333 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 ENAHQ8N8S7 591 aaPredicted RBP15.69■□□□□ 0.1
MSH6-208ENST00000493177 IL27Q8NEV9 243 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 IGDCC4Q8TDY8 1250 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 LPAR1Q92633 364 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 NUDT12Q9BQG2 462 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 KAT14Q9H8E8 782 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 LY9Q9HBG7 655 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms