RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PATL2C9JE40 543 aaKnown RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 NPHP1O15259 732 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 PLA2G6O60733 806 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 MAP3K21Q5TCX8 1036 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 CBX8Q9HC52 389 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 ZSWIM5Q9P217 1185 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 TACC3Q9Y6A5 838 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 KIF28PB7ZC32 967 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 POTEIP0CG38 1075 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 POTEJP0CG39 1038 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 ZNF165P49910 485 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 EVCP57679 992 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 ANKRD13AQ8IZ07 590 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 CMTR1Q8N1G2 835 aaKnown RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 MSL3Q8N5Y2 521 aaKnown RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 ZNF333Q96JL9 665 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 FAM84BQ96KN1 310 aaPredicted RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 ALG1Q9BT22 464 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 PCDHA7Q9UN72 937 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 PTPN22Q9Y2R2 807 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 GOLGA8AA7E2F4 631 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 SH2B2O14492 632 aaPredicted RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 ZBTB43O43298 467 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 KINO60870 393 aaKnown RBP8.1□□□□□ -1.11
HERC4-211ENST00000492996 TAF3Q5VWG9 929 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 SYNE3Q6ZMZ3 975 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 ADGRA1Q86SQ6 560 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 MARCKSP29966 332 aaPredicted RBP8.09□□□□□ -1.11
HERC4-211ENST00000492996 SNX17Q15036 470 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 MFSD6Q6ZSS7 791 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 DRC7Q8IY82 874 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 SDF4Q9BRK5 362 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 ZC3H12CQ9C0D7 883 aaKnown RBP8.09□□□□□ -1.11
HERC4-211ENST00000492996 CYP2D7A0A087X1C5 515 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 FKTNO75072 461 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 XRCC5P13010 732 aaKnown RBP8.09□□□□□ -1.11
HERC4-211ENST00000492996 KLRK1P26718 216 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 IGDCC4Q8TDY8 1250 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 NUP133Q8WUM0 1156 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 CHMP4CQ96CF2 233 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 GPR101Q96P66 508 aaPredicted RBP8.09□□□□□ -1.11
HERC4-211ENST00000492996 SLC26A6Q9BXS9 759 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 TRIM5Q9C035 493 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 MKRN1Q9UHC7 482 aaKnown RBP8.09□□□□□ -1.11
HERC4-211ENST00000492996 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
HERC4-211ENST00000492996 CCDC69A6NI79 296 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 HOXC6P09630 235 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 GHRHRQ02643 423 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 CHAF1AQ13111 956 aaPredicted RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 SLC4A8Q2Y0W8 1093 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 AKNAD1Q5T1N1 836 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 MYSM1Q5VVJ2 828 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 CPLX2Q6PUV4 134 aaKnown RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 SAMD1Q6SPF0 538 aaPredicted RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 SLC51AQ86UW1 340 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 TNS4Q8IZW8 715 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 ABRAQ8N0Z2 381 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 FBXL16Q8N461 479 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 SHCBP1Q8NEM2 672 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 LY9Q9HBG7 655 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 ADAMTS5Q9UNA0 930 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 ZNF500O60304 480 aaPredicted RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 PRDM1O75626 825 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 TNNI2P48788 182 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 DYNLL1P63167 89 aaKnown RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 KRT40Q6A162 431 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 APOBEC3HQ6NTF7 200 aaKnown RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 C11orf57Q6ZUT1 292 aaPredicted RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 ZNF70Q9UC06 446 aaPredicted RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 SNCAIPQ9Y6H5 919 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 IREB2P48200 963 aaKnown RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 KIF23Q02241 960 aaPredicted RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 SNW1Q13573 536 aaKnown RBP8.08□□□□□ -1.12
HERC4-211ENST00000492996 CNPY4Q8N129 248 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 LINC00301Q8NCQ3 95 aa8.08□□□□□ -1.12
HERC4-211ENST00000492996 BIN1O00499 593 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 SPTLC2O15270 562 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 UFL1O94874 794 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 ATP2B1P20020 1258 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 COPB2P35606 906 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 NDUFA8P51970 172 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 FAM160A1Q05DH4 1040 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 CAVIN4Q5BKX8 364 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 ISM2Q6H9L7 571 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 TATDN1Q6P1N9 297 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 MRPS27Q92552 414 aaKnown RBP8.07□□□□□ -1.12
HERC4-211ENST00000492996 TMEM87BQ96K49 555 aa8.07□□□□□ -1.12
HERC4-211ENST00000492996 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
HERC4-211ENST00000492996 HERC5Q9UII4 1024 aaKnown RBP8.07□□□□□ -1.12
HERC4-211ENST00000492996 RANBP6O60518 1105 aaKnown RBP8.07□□□□□ -1.12
HERC4-211ENST00000492996 GUCY1A2P33402 732 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms