RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 BAZ2AQ9UIF9 1905 aaKnown RBP13.3□□□□□ -0.28
SND1-215ENST00000492772 CDH23Q9H251 3354 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 TCRBV5S4A2TA0A5A2 114 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 KCTD2Q14681 263 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 TMEM132BQ14DG7 1078 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 AMOTL1Q8IY63 956 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 SPICE1Q8N0Z3 855 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 MMP19Q99542 508 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 DNAJC2Q99543 621 aaKnown RBP13.29□□□□□ -0.28
SND1-215ENST00000492772 TINF2Q9BSI4 451 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
SND1-215ENST00000492772 MYH7P12883 1935 aa13.29□□□□□ -0.28
SND1-215ENST00000492772 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
SND1-215ENST00000492772 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 GOLIM4O00461 696 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 CYP2D6P10635 497 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 RLBP1P12271 317 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 AKR1A1P14550 325 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 AKR1B1P15121 316 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 RAG1P15918 1043 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 FPGSQ05932 587 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
SND1-215ENST00000492772 RIOX2Q8IUF8 465 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 CLEC10AQ8IUN9 316 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
SND1-215ENST00000492772 DYNLL2Q96FJ2 89 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 IL1RAPL2Q9NP60 686 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 ATP8A2Q9NTI2 1148 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
SND1-215ENST00000492772 SMCHD1A6NHR9 2005 aa13.27□□□□□ -0.28
SND1-215ENST00000492772 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
SND1-215ENST00000492772 SIAH1Q8IUQ4 282 aa13.27□□□□□ -0.29
SND1-215ENST00000492772 CLASRPQ8N2M8 674 aaKnown RBP13.27□□□□□ -0.29
SND1-215ENST00000492772 RHPN1Q8TCX5 695 aa13.27□□□□□ -0.29
SND1-215ENST00000492772 ARMT1Q9H993 441 aa13.27□□□□□ -0.29
SND1-215ENST00000492772 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
SND1-215ENST00000492772 CNPY2Q9Y2B0 182 aa13.27□□□□□ -0.29
SND1-215ENST00000492772 GREB1LQ9C091 1923 aaPredicted RBP13.27□□□□□ -0.29
SND1-215ENST00000492772 MBD4O95243 580 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 PGK1P00558 417 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 PGK2P07205 417 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 IFIT2P09913 472 aaKnown RBP13.26□□□□□ -0.29
SND1-215ENST00000492772 ITGB8P26012 769 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 ZNF792Q3KQV3 632 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 C16orf86Q6ZW13 317 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 ANKRD33Q7Z3H0 272 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
SND1-215ENST00000492772 KIF1BPQ96EK5 621 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 TOX2Q96NM4 488 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 TSEN34Q9BSV6 310 aaKnown RBP13.26□□□□□ -0.29
SND1-215ENST00000492772 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.26□□□□□ -0.292e-21■■■■■ 38.6
SND1-215ENST00000492772 KANSL2Q9H9L4 492 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
SND1-215ENST00000492772 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 VWA5AO00534 786 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 ADAMTS4O75173 837 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 ZNF865P0CJ78 1059 aaPredicted RBP13.25□□□□□ -0.29
SND1-215ENST00000492772 EEF2P13639 858 aaKnown RBP13.25□□□□□ -0.29
SND1-215ENST00000492772 ADD2P35612 726 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 STAT3P40763 770 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 CDK8P49336 464 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 EPHB4P54760 987 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 C12orf60Q5U649 245 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 NUP133Q8WUM0 1156 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 PRDM6Q9NQX0 595 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 STARD7Q9NQZ5 370 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
SND1-215ENST00000492772 ZNF214Q9UL59 606 aaPredicted RBP13.25□□□□□ -0.29
SND1-215ENST00000492772 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
SND1-215ENST00000492772 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
SND1-215ENST00000492772 PRKAB2O43741 272 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
SND1-215ENST00000492772 DNAJB2P25686 324 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 ACLYP53396 1101 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 CCDC174Q6PII3 467 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 FBXO28Q9NVF7 368 aa13.24□□□□□ -0.29
SND1-215ENST00000492772 TTC28Q96AY4 2481 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 USP17L21D6R901 530 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 HMMRO75330 724 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 FAAP100Q0VG06 881 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 TJAP1Q5JTD0 557 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 FAM83BQ5T0W9 1011 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 LENG1Q96BZ8 264 aaPredicted RBP13.23□□□□□ -0.29
SND1-215ENST00000492772 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
SND1-215ENST00000492772 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
SND1-215ENST00000492772 APBB1O00213 710 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms