RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 FOSL2P15408 326 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 CYP7A1P22680 504 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 GRB14Q14449 540 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 LBX2Q6XYB7 198 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 BADQ92934 168 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 GPR108Q9NPR9 543 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 PRDM6Q9NQX0 595 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 FLRT1Q9NZU1 646 aa11.87□□□□□ -0.51
TNFRSF9-203ENST00000492571 PTPRFP10586 1907 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 SEPT4O43236 478 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 IDH1O75874 414 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 VCAM1P19320 739 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 COG2Q14746 738 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 OLFML2BQ68BL8 750 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 TATDN1Q6P1N9 297 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 EHD4Q9H223 541 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 RPAP3Q9H6T3 665 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 TACC3Q9Y6A5 838 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
TNFRSF9-203ENST00000492571 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 TMEM265A0A087WTH1 108 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 MPHOSPH10O00566 681 aaKnown RBP11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 CNMDO75829 334 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 ADORA2AP29274 412 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 SHROOM1Q2M3G4 852 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 TNNI3KQ59H18 835 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 ZNF512BQ96KM6 892 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 TANGO6Q9C0B7 1094 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 BTBD7Q9P203 1132 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 FPGT-TNNI3KV9GXZ4 949 aa11.85□□□□□ -0.51
TNFRSF9-203ENST00000492571 ALPK3Q96L96 1907 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 CYBAP13498 195 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 ZAP70P43403 619 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 DYNLL1P63167 89 aaKnown RBP11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 PLS1Q14651 629 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 TRIM60Q495X7 471 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 C9orf50Q5SZB4 431 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 ANO1Q5XXA6 986 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 ADGRA1Q86SQ6 560 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 RNF180Q86T96 592 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 MB21D1Q8N884 522 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 MIGA1Q8NAN2 632 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 FERMT2Q96AC1 680 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 RNPC3Q96LT9 517 aaKnown RBP11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 DBNDD2Q9BQY9 259 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 MROH8Q9H579 483 aa11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 LAMA2P24043 3122 aaKnown RBP11.84□□□□□ -0.51
TNFRSF9-203ENST00000492571 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 SURF6O75683 361 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 RARBP10826 455 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 FCER1AP12319 257 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 RAG1P15918 1043 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 ERCC3P19447 782 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 RARSP54136 660 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 ABRAQ8N0Z2 381 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 ACER1Q8TDN7 264 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 SPATC1LQ9H0A9 340 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 DNAH12Q6ZR08 3092 aa11.83□□□□□ -0.52
TNFRSF9-203ENST00000492571 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 CLTBP09497 229 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 TLE2Q04725 743 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 LRRC41Q15345 812 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 SH2D4AQ9H788 454 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 XPNPEP3Q9NQH7 507 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 PDLIM7Q9NR12 457 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 TMEM39AQ9NV64 488 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
TNFRSF9-203ENST00000492571 VCANP13611 3396 aa11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 FLOT1O75955 427 aa11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 SEPT2Q15019 361 aa11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 SNX17Q15036 470 aa11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 E2F4Q16254 413 aa11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 TTYH1Q9H313 450 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 PIH1D3Q9NQM4 214 aaKnown RBP11.81□□□□□ -0.52
TNFRSF9-203ENST00000492571 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
TNFRSF9-203ENST00000492571 TRIM43BA6NCK2 446 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms