RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 POLR3DP05423 398 aaPredicted RBP15.87■□□□□ 0.13
HDAC3-213ENST00000492506 NCAPG2Q86XI2 1143 aa15.87■□□□□ 0.13
HDAC3-213ENST00000492506 USP38Q8NB14 1042 aa15.87■□□□□ 0.13
HDAC3-213ENST00000492506 ATG4CQ96DT6 458 aa15.87■□□□□ 0.13
HDAC3-213ENST00000492506 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
HDAC3-213ENST00000492506 SLC5A4Q9NY91 659 aa15.87■□□□□ 0.13
HDAC3-213ENST00000492506 CLTBP09497 229 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 PLS1Q14651 629 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 GRIN2CQ14957 1233 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 TMEM132BQ14DG7 1078 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 CLEC10AQ8IUN9 316 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 SLC44A5Q8NCS7 719 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 XPNPEP3Q9NQH7 507 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 MCM9Q9NXL9 1143 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 ADAMTS5Q9UNA0 930 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 NCOR1O75376 2440 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 ROBO3Q96MS0 1386 aa15.86■□□□□ 0.13
HDAC3-213ENST00000492506 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 MPHOSPH10O00566 681 aaKnown RBP15.85■□□□□ 0.13
HDAC3-213ENST00000492506 FLOT1O75955 427 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 PGK1P00558 417 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 CYP2D6P10635 497 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 FCER1AP12319 257 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
HDAC3-213ENST00000492506 TMEM179Q6ZVK1 233 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 SYMPKQ92797 1274 aaKnown RBP15.85■□□□□ 0.13
HDAC3-213ENST00000492506 NRBP1Q9UHY1 535 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 TMX2Q9Y320 296 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 BDP1A6H8Y1 2624 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 MCM3APO60318 1980 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 CHD7Q9P2D1 2997 aa15.85■□□□□ 0.13
HDAC3-213ENST00000492506 GBF1Q92538 1859 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 A0A1W2PQ45 241 aaPredicted RBP15.84■□□□□ 0.13
HDAC3-213ENST00000492506 A0A1W2PQY0 241 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 ZNF865P0CJ78 1059 aaPredicted RBP15.84■□□□□ 0.13
HDAC3-213ENST00000492506 RARBP10826 455 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 PDE6AP16499 860 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 FAAP100Q0VG06 881 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 B4GALNT3Q6L9W6 998 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 SPICE1Q8N0Z3 855 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 SDR42E1Q8WUS8 393 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 TINF2Q9BSI4 451 aa15.84■□□□□ 0.13
HDAC3-213ENST00000492506 DCP1AQ9NPI6 582 aaPredicted RBP15.84■□□□□ 0.13
HDAC3-213ENST00000492506 TCRBV5S4A2TA0A5A2 114 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 SMIM22K7EJ46 135 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 PQBP1O60828 265 aaKnown RBP15.83■□□□□ 0.12
HDAC3-213ENST00000492506 ADAMTS4O75173 837 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 SLC25A27O95847 323 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 PGK2P07205 417 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 AKR1B1P15121 316 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 RAG1P15918 1043 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 DNAJB2P25686 324 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 FPGSQ05932 587 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 ZNF792Q3KQV3 632 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 ZKSCAN2Q63HK3 967 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 ANKRD33Q7Z3H0 272 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 RNF180Q86T96 592 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 LENG1Q96BZ8 264 aaPredicted RBP15.83■□□□□ 0.12
HDAC3-213ENST00000492506 DYNLL2Q96FJ2 89 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 TOX2Q96NM4 488 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 CRNKL1Q9BZJ0 848 aaKnown RBP15.83■□□□□ 0.12
HDAC3-213ENST00000492506 VCPKMTQ9H867 229 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
HDAC3-213ENST00000492506 DIS3Q9Y2L1 958 aaKnown RBP15.83■□□□□ 0.12
HDAC3-213ENST00000492506 MYH7P12883 1935 aa15.83■□□□□ 0.12
HDAC3-213ENST00000492506 GREB1LQ9C091 1923 aaPredicted RBP15.83■□□□□ 0.12
HDAC3-213ENST00000492506 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.82■□□□□ 0.12
HDAC3-213ENST00000492506 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.82■□□□□ 0.12
HDAC3-213ENST00000492506 WDR46O15213 610 aaKnown RBP15.82■□□□□ 0.12
HDAC3-213ENST00000492506 TJAP1Q5JTD0 557 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 SLC9C2Q5TAH2 1124 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 RIOX2Q8IUF8 465 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 LCORLQ8N3X6 602 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 MMP19Q99542 508 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 TMEM39AQ9NV64 488 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 FBXO28Q9NVF7 368 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
HDAC3-213ENST00000492506 CCSAPQ6IQ19 270 aaPredicted RBP15.81■□□□□ 0.12
HDAC3-213ENST00000492506 AACSQ86V21 672 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 REPS2Q8NFH8 660 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 TSEN34Q9BSV6 310 aaKnown RBP15.81■□□□□ 0.12
HDAC3-213ENST00000492506 ZNF576Q9H609 170 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 ZNF532Q9HCE3 1301 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 ARHGEF10LQ9HCE6 1279 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 TBX21Q9UL17 535 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 ZNF214Q9UL59 606 aaPredicted RBP15.81■□□□□ 0.12
HDAC3-213ENST00000492506 XIRP2A4UGR9 3374 aa15.81■□□□□ 0.12
HDAC3-213ENST00000492506 SYNRGQ9UMZ2 1314 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 RLBP1P12271 317 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 AKR1A1P14550 325 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 ACLYP53396 1101 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 ICA1Q05084 483 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 TTF1Q15361 905 aaPredicted RBP15.8■□□□□ 0.12
HDAC3-213ENST00000492506 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 C16orf59Q7L2K0 433 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 KLHDC9Q8NEP7 349 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.129e-10■■■■■ 36.2
HDAC3-213ENST00000492506 EXOC6BQ9Y2D4 811 aa15.8■□□□□ 0.12
HDAC3-213ENST00000492506 TRANK1O15050 2925 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 TNFRSF10AO00220 468 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms