RNA–Protein interactions for RNA: ENST00000492472.1

RBM5-223, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-223	ENST00000492472	RNF40	O75150	1001 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	GLRX3	O76003	335 aa	Known RBP	10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	TFRC	P02786	760 aa	Known RBP	10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	PDE6A	P16499	860 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	SLC4A3	P48751	1232 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	HABP4	Q5JVS0	413 aa	Known RBP	10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	SHISA4	Q96DD7	197 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	NUDT12	Q9BQG2	462 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	RIOK1	Q9BRS2	568 aa	Known RBP	10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	BCL11A	Q9H165	835 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	UNC93B1	Q9H1C4	597 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	PAG1	Q9NWQ8	432 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	MCM9	Q9NXL9	1143 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	NR2E3	Q9Y5X4	410 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	NDUFB9	Q9Y6M9	179 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	ZNF532	Q9HCE3	1301 aa		10.29	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L15	C9J2P7	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L13	C9JLJ4	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L11	C9JVI0	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L18	D6R9N7	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L22	D6RA61	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L17	D6RBQ6	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L19	D6RCP7	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L20	D6RJB6	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	ERVK-9	P63128	1117 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	ERVK-24	P63145	666 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	USP17L24	Q0WX57	530 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	ZSCAN25	Q6NSZ9	544 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	ANKLE1	Q8NAG6	615 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	NLRP7	Q8WX94	980 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	GPATCH3	Q96I76	525 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	LRCH3	Q96II8	777 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	C12orf42	Q96LP6	360 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	DEFB118	Q96PH6	123 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	P2RX7	Q99572	595 aa	Known RBP	10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	LRRCC1	Q9C099	1032 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	HMX1	Q9NP08	348 aa	Predicted RBP	10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	PAK6	Q9NQU5	681 aa	Predicted RBP	10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	ATP8A2	Q9NTI2	1148 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	SWAP70	Q9UH65	585 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	RPTOR	Q8N122	1335 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	PLXNB2	O15031	1838 aa		10.28	□□□□□ -0.76
RBM5-223	ENST00000492472	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.27	□□□□□ -0.76
RBM5-223	ENST00000492472	MPHOSPH10	O00566	681 aa	Known RBP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	XRCC5	P13010	732 aa	Known RBP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	ATP5J	P18859	108 aa		10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	ZYX	Q15942	572 aa	Known RBP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	SWT1	Q5T5J6	900 aa	Known RBP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	RNF166	Q96A37	237 aa	Predicted RBP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	PAGR1	Q9BTK6	254 aa		10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	KIAA1683	Q9H0B3	1180 aa		10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	SH2D4A	Q9H788	454 aa		10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.27	□□□□□ -0.77
RBM5-223	ENST00000492472	RABGAP1	Q9Y3P9	1069 aa		10.27	□□□□□ -0.77
RBM5-223	ENST00000492472		H0YGN5	161 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	ZKSCAN1	P17029	563 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	CYP2B6	P20813	491 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	SHMT1	P34896	483 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	RGS2	P41220	211 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	PLCD1	P51178	756 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	TMEM179	Q6ZVK1	233 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	NECAB2	Q7Z6G3	386 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	PLEKHH3	Q7Z736	793 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	UBE2Q1	Q7Z7E8	422 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	PHOX2B	Q99453	314 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	HAUS7	Q99871	368 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	BOLA2	Q9H3K6	86 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	TMEM134	Q9H6X4	195 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	GJD2	Q9UKL4	321 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	IVNS1ABP	Q9Y6Y0	642 aa		10.26	□□□□□ -0.77
RBM5-223	ENST00000492472	TCRBV5S4A2T	A0A5A2	114 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	TRIM66	O15016	1216 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	VCAM1	P19320	739 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	ADD2	P35612	726 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	JAG1	P78504	1218 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	MDM2	Q00987	491 aa	Predicted RBP	10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	UBE3C	Q15386	1083 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	WDR78	Q5VTH9	848 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	CATSPERG	Q6ZRH7	1159 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	SIRT2	Q8IXJ6	389 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	LCORL	Q8N3X6	602 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	SDR42E1	Q8WUS8	393 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	APBA2	Q99767	749 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	ARHGEF10L	Q9HCE6	1279 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	TXNRD2	Q9NNW7	524 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	HOXC10	Q9NYD6	342 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	RBPJL	Q9UBG7	517 aa		10.25	□□□□□ -0.77
RBM5-223	ENST00000492472	SOWAHB	A6NEL2	793 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	MBD4	O95243	580 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	GABPA	Q06546	454 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	SEPT2	Q15019	361 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	LBX2	Q6XYB7	198 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	GPR142	Q7Z601	462 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	TRIB2	Q92519	343 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	LPAR1	Q92633	364 aa		10.24	□□□□□ -0.77
RBM5-223	ENST00000492472	CCDC17	Q96LX7	622 aa		10.24	□□□□□ -0.77

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