RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ADAM7Q9H2U9 754 aa4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 METTL5Q9NRN9 209 aaKnown RBP4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 MBD1Q9UIS9 605 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P30-201ENST00000492455 N4BP3O15049 544 aa4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 GRK4P32298 578 aa4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 ZNF76P36508 570 aa4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 WIPI1Q5MNZ9 446 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 CNKSR3Q6P9H4 555 aa4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 TSPYL5Q86VY4 417 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 COPRSQ9NQ92 184 aa4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 TTF2Q9UNY4 1162 aaKnown RBP4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 PCDHA11Q9Y5I1 949 aa4.84□□□□□ -1.63
HMGB1P30-201ENST00000492455 LMNB1P20700 586 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 RACK1P63244 317 aaKnown RBP4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 ZNF827Q17R98 1081 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 VMACQ2NL98 169 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 PCNX4Q63HM2 1172 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 SIRT2Q8IXJ6 389 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 SYT8Q8NBV8 401 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 GPR62Q9BZJ7 368 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 SRRDQ9UH36 339 aa4.83□□□□□ -1.64
HMGB1P30-201ENST00000492455 K7ESM1 405 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 CILPO75339 1184 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 ITGAEP38570 1179 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 EPHB3P54753 998 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 ZNF394Q53GI3 561 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 SV2BQ7L1I2 683 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 NT5DC4Q86YG4 428 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 RNF34Q969K3 372 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 Q96M66 194 aa4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 NOC4LQ9BVI4 516 aaKnown RBP4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 CNOT11Q9UKZ1 510 aaKnown RBP4.82□□□□□ -1.64
HMGB1P30-201ENST00000492455 F6X3S4 739 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 ABLIM1O14639 778 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 CCDC85BQ15834 202 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 SLC14A2Q15849 920 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 LINC01356Q8N9X3 169 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 PHC3Q8NDX5 983 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 RHOVQ96L33 236 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 DPH2Q9BQC3 489 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 BCL11AQ9H165 835 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 KBTBD4Q9NVX7 518 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 DDX41Q9UJV9 622 aaKnown RBP4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 PCDHGB7Q9Y5F8 929 aa4.81□□□□□ -1.64
HMGB1P30-201ENST00000492455 AKAP8O43823 692 aaKnown RBP4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 PGRP06401 933 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 TFE3P19532 575 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 GARTP22102 1010 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 VIPR1P32241 457 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 LIG3P49916 1009 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 GALK1P51570 392 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 PDE4BQ07343 736 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 SLC6A19Q695T7 634 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 HHIPL2Q6UWX4 724 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 HS2ST1Q7LGA3 356 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 MRPL41Q8IXM3 137 aaKnown RBP4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 DTWD2Q8NBA8 298 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 MZB1Q8WU39 189 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 RSRP1Q9BUV0 290 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 CRTAC1Q9NQ79 661 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 GGT7Q9UJ14 662 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 CEP131Q9UPN4 1083 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 TLR6Q9Y2C9 796 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 TACC3Q9Y6A5 838 aa4.8□□□□□ -1.64
HMGB1P30-201ENST00000492455 ZXDAP98168 799 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 RTP5Q14D33 572 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 MAP3K11Q16584 847 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 CLEC16AQ2KHT3 1053 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 AGMOQ6ZNB7 445 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 GAL3ST3Q96A11 431 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 SHISA4Q96DD7 197 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 TMEM87BQ96K49 555 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 PWWP2AQ96N64 755 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 CNTD2Q9H8S5 307 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 KCNQ5Q9NR82 932 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 ADAMTS1Q9UHI8 967 aa4.79□□□□□ -1.64
HMGB1P30-201ENST00000492455 IRS4O14654 1257 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 GRIN3BO60391 1043 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 ERCC5P28715 1186 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 KCNC1P48547 511 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 TNNI2P48788 182 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 PTPN11Q06124 597 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 TMEM62Q0P6H9 643 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 UBXN11Q5T124 520 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 TTBK2Q6IQ55 1244 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 NLRX1Q86UT6 975 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 USP48Q86UV5 1035 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 FAM129CQ86XR2 697 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 DNAJB8Q8NHS0 232 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 TMEM74Q96NL1 305 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 TGIF2Q9GZN2 237 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 EPB41L4AQ9HCS5 686 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 USP40Q9NVE5 1235 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 TJP2Q9UDY2 1190 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 ZMYM5Q9UJ78 669 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 PCDHB5Q9Y5E4 795 aa4.78□□□□□ -1.64
HMGB1P30-201ENST00000492455 CDR1P51861 262 aa4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 RPS26P62854 115 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms