RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 PI4KBQ9UBF8 816 aa11.31□□□□□ -0.6
NCKAP1-206ENST00000492058 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
NCKAP1-206ENST00000492058 COL2A1P02458 1487 aaPredicted RBP11.31□□□□□ -0.6
NCKAP1-206ENST00000492058 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 TRIM43BA6NCK2 446 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 MSCO60682 206 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 CIAO1O76071 339 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 CFHP08603 1231 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 IL15P40933 162 aaPredicted RBP11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 CCNA1P78396 465 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 TRIM43Q96BQ3 446 aaPredicted RBP11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 MYH2Q9UKX2 1941 aa11.3□□□□□ -0.6
NCKAP1-206ENST00000492058 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 UBTFL1P0CB47 393 aaPredicted RBP11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 DPP9Q86TI2 863 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 MAPKAPK5Q8IW41 473 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 NPLOC4Q8TAT6 608 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 LRP2BPQ9P2M1 347 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 RABGAP1Q9Y3P9 1069 aa11.29□□□□□ -0.6
NCKAP1-206ENST00000492058 ADH1BP00325 375 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 EPHB4P54760 987 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 TLE2Q04725 743 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 TFCP2Q12800 502 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 PTGDRQ13258 359 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 CCDC85BQ15834 202 aaPredicted RBP11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 PRAMEF19Q5SWL8 479 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 GTF3C2Q8WUA4 911 aaPredicted RBP11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 TGFBRAP1Q8WUH2 860 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 FEZ1Q99689 392 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 HMG20BQ9P0W2 317 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 PALD1Q9ULE6 856 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 BDP1A6H8Y1 2624 aa11.28□□□□□ -0.6
NCKAP1-206ENST00000492058 LOC285556D6RIA3 1793 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 A0A1B0GUL7 405 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 CNMDO75829 334 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 PLA2G5P39877 138 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 MVPQ14764 893 aaKnown RBP11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 SPATA5Q8NB90 893 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 DHX36Q9H2U1 1008 aaKnown RBP11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 PTPRCP08575 1304 aa11.27□□□□□ -0.61
NCKAP1-206ENST00000492058 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 GH2P01242 217 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 RAG1P15918 1043 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 ITGB8P26012 769 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 MAP3K12Q12852 859 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 RAB3GAP1Q15042 981 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 IL27Q8NEV9 243 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 ADAMTS19Q8TE59 1207 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 DNAJC18Q9H819 358 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 BTBD7Q9P203 1132 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 TACC3Q9Y6A5 838 aa11.26□□□□□ -0.61
NCKAP1-206ENST00000492058 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 PQBP1O60828 265 aaKnown RBP11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 BAG3O95817 575 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 CYBAP13498 195 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 CCDC129Q6ZRS4 1044 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 TIFAQ96CG3 184 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 ASB2Q96Q27 587 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 UHRF1Q96T88 793 aaPredicted RBP11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 GAS2L1Q99501 681 aaPredicted RBP11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 PRDM12Q9H4Q4 367 aa11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms