RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-219ENST00000491747 USP17L24Q0WX57 530 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 HS1BP3Q53T59 392 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 RBPJLQ9UBG7 517 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 HTTP42858 3142 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 NEDD4P46934 1319 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 Q3C1V9 767 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
BRCA1-219ENST00000491747 AKNAD1Q5T1N1 836 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 CAVIN1Q6NZI2 390 aaKnown RBP11.02□□□□□ -0.65
BRCA1-219ENST00000491747 STAG1Q8WVM7 1258 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 RUFY2Q8WXA3 655 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 ABHD8Q96I13 439 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 EFCC1Q9HA90 598 aa11.02□□□□□ -0.65
BRCA1-219ENST00000491747 TSPY2A6NKD2 308 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 ZNF213O14771 459 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 RANBP6O60518 1105 aaKnown RBP11.01□□□□□ -0.65
BRCA1-219ENST00000491747 CNMDO75829 334 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
BRCA1-219ENST00000491747 PSMC4P43686 418 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 ZSCAN23Q3MJ62 389 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 MKL1Q969V6 931 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 LMBRD1Q9NUN5 540 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 GCLCP48506 637 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-219ENST00000491747 FAM110CQ1W6H9 321 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
BRCA1-219ENST00000491747 NUP88Q99567 741 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-219ENST00000491747 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 SH2D4AQ9H788 454 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 TOMM22Q9NS69 142 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 MORF4L1Q9UBU8 362 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 PTPN22Q9Y2R2 807 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
BRCA1-219ENST00000491747 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
BRCA1-219ENST00000491747 F5H6K3 240 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 TTLL1O95922 423 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 KLRC3Q07444 240 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
BRCA1-219ENST00000491747 PDZRN4Q6ZMN7 1036 aaPredicted RBP11□□□□□ -0.65
BRCA1-219ENST00000491747 MFSD6Q6ZSS7 791 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 LPAR1Q92633 364 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 TANGO6Q9C0B7 1094 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 BTBD7Q9P203 1132 aa11□□□□□ -0.65
BRCA1-219ENST00000491747 RAD21O60216 631 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 NOVP48745 357 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 KIF22Q14807 665 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
BRCA1-219ENST00000491747 FAM83BQ5T0W9 1011 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 KIAA1211Q6ZU35 1233 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 FBXO28Q9NVF7 368 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 GABRQQ9UN88 632 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
BRCA1-219ENST00000491747 OFD1O75665 1012 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-219ENST00000491747 NDUFB10O96000 172 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 CYP21A2P08686 494 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 TERF1P54274 439 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 COG2Q14746 738 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
BRCA1-219ENST00000491747 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 LSG1Q9H089 658 aaKnown RBP10.99□□□□□ -0.65
BRCA1-219ENST00000491747 GOPCQ9HD26 462 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 CTNNA3Q9UI47 895 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 PTCH2Q9Y6C5 1203 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 CENPFP49454 3210 aa10.99□□□□□ -0.65
BRCA1-219ENST00000491747 DSG3P32926 999 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 ERVK-24P63145 666 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 LBX2Q6XYB7 198 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 PORCNQ9H237 461 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 B4E1Z4 1266 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 CAPN15O75808 1086 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 FCGRTP55899 365 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 PRKCZQ05513 592 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 PKP1Q13835 747 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 GPRC5AQ8NFJ5 357 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 ATG4CQ96DT6 458 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 TCP11L1Q9NUJ3 509 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 SRRDQ9UH36 339 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
BRCA1-219ENST00000491747 KDM4AO75164 1064 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 PRPF40AO75400 957 aaKnown RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 FLOT1O75955 427 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 PCP11498 1178 aaKnown RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 GMCL1P1Q8NEA9 526 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 RNF41Q9H4P4 317 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 ZSWIM5Q9P217 1185 aa10.97□□□□□ -0.65
BRCA1-219ENST00000491747 RBM8AQ9Y5S9 174 aaKnown RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 U3KPZ7 1027 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-219ENST00000491747 GNRH1P01148 92 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms