RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RASGRP2Q7LDG7 609 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 C17orf53Q8N3J3 647 aaPredicted RBP26.25■■□□□ 1.79
USF3-203ENST00000491165 MTA3Q9BTC8 594 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 ZNF341Q9BYN7 854 aa26.25■■□□□ 1.79
USF3-203ENST00000491165 EVCP57679 992 aa26.24■■□□□ 1.79
USF3-203ENST00000491165 IFIT1BQ5T764 474 aaKnown RBP26.24■■□□□ 1.79
USF3-203ENST00000491165 MTERF4Q7Z6M4 381 aaKnown RBP26.24■■□□□ 1.79
USF3-203ENST00000491165 CKAP2LQ8IYA6 745 aa26.24■■□□□ 1.79
USF3-203ENST00000491165 ZSCAN16Q9H4T2 348 aaPredicted RBP26.24■■□□□ 1.79
USF3-203ENST00000491165 KLF18A0A0U1RQI7 1052 aa26.24■■□□□ 1.79
USF3-203ENST00000491165 ERICH2A1L162 156 aa26.24■■□□□ 1.79
USF3-203ENST00000491165 NT5C2P49902 561 aa26.24■■□□□ 1.79
USF3-203ENST00000491165 TMEM179Q6ZVK1 233 aa26.24■■□□□ 1.79
USF3-203ENST00000491165 APOA5Q6Q788 366 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 DGKHQ86XP1 1220 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.23■■□□□ 1.79
USF3-203ENST00000491165 BICD2Q8TD16 824 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 TMEM47Q9BQJ4 181 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 HPS5Q9UPZ3 1129 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 ITGBL1O95965 494 aaPredicted RBP26.23■■□□□ 1.79
USF3-203ENST00000491165 SPC24Q8NBT2 197 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 LLPHQ9BRT6 129 aaKnown RBP26.23■■□□□ 1.79
USF3-203ENST00000491165 KCNF1Q9H3M0 494 aa26.23■■□□□ 1.79
USF3-203ENST00000491165 PDIA3P30101 505 aaKnown RBP26.22■■□□□ 1.79
USF3-203ENST00000491165 ANO6Q4KMQ2 910 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 LUZP1Q86V48 1076 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 CHMP4CQ96CF2 233 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 HOOK2Q96ED9 719 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 PGBD1Q96JS3 809 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 ZNF408Q9H9D4 720 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 PHIPQ8WWQ0 1821 aa26.22■■□□□ 1.79
USF3-203ENST00000491165 EEF2P13639 858 aaKnown RBP26.21■■□□□ 1.79
USF3-203ENST00000491165 SCRN1Q12765 414 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 NFXL1Q6ZNB6 911 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.21■■□□□ 1.79
USF3-203ENST00000491165 SMARCC2Q8TAQ2 1214 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 KIAA1524Q8TCG1 905 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 ANKS1AQ92625 1134 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 CFAP45Q9UL16 551 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 NAP1L2Q9ULW6 460 aaPredicted RBP26.21■■□□□ 1.79
USF3-203ENST00000491165 A0A1W2PRG0 241 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 CTNND1O60716 968 aaKnown RBP26.21■■□□□ 1.79
USF3-203ENST00000491165 PFKFB2O60825 505 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 CHADLQ6NUI6 762 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 LRRC47Q8N1G4 583 aaKnown RBP26.21■■□□□ 1.79
USF3-203ENST00000491165 DDX11Q96FC9 970 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 CBX8Q9HC52 389 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 CABP5Q9NP86 173 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 CLIP2Q9UDT6 1046 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 PCNTO95613 3336 aa26.21■■□□□ 1.79
USF3-203ENST00000491165 NR1I2O75469 434 aa26.2■■□□□ 1.79
USF3-203ENST00000491165 ICA1Q05084 483 aa26.2■■□□□ 1.79
USF3-203ENST00000491165 MICU3Q86XE3 530 aa26.2■■□□□ 1.79
USF3-203ENST00000491165 CCDC144CPQ8IYA2 1237 aa26.2■■□□□ 1.79
USF3-203ENST00000491165 ZNF654Q8IZM8 581 aa26.2■■□□□ 1.79
USF3-203ENST00000491165 NCOA5Q9HCD5 579 aaKnown RBP26.2■■□□□ 1.79
USF3-203ENST00000491165 CCDC69A6NI79 296 aa26.2■■□□□ 1.78
USF3-203ENST00000491165 TTLL1O95922 423 aa26.2■■□□□ 1.78
USF3-203ENST00000491165 ECE1P42892 770 aa26.2■■□□□ 1.78
USF3-203ENST00000491165 ATP2B2Q01814 1243 aa26.2■■□□□ 1.78
USF3-203ENST00000491165 TROAPQ12815 778 aa26.2■■□□□ 1.78
USF3-203ENST00000491165 KANSL2Q9H9L4 492 aa26.2■■□□□ 1.78
USF3-203ENST00000491165 PPP1R12BO60237 982 aaPredicted RBP26.19■■□□□ 1.78
USF3-203ENST00000491165 ASNSP08243 561 aa26.19■■□□□ 1.78
USF3-203ENST00000491165 YY1P25490 414 aa26.19■■□□□ 1.78
USF3-203ENST00000491165 CCT2P78371 535 aaKnown RBP26.19■■□□□ 1.78
USF3-203ENST00000491165 ACER1Q8TDN7 264 aa26.19■■□□□ 1.78
USF3-203ENST00000491165 SLC12A7Q9Y666 1083 aa26.19■■□□□ 1.78
USF3-203ENST00000491165 MYH15Q9Y2K3 1946 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 GOLGA8BA8MQT2 603 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 PNMA1Q8ND90 353 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 ZNF274Q96GC6 653 aaPredicted RBP26.18■■□□□ 1.78
USF3-203ENST00000491165 PYCARDQ9ULZ3 195 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 MTMR7Q9Y216 660 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 VGLL4Q14135 290 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 SCYL3Q8IZE3 742 aa26.18■■□□□ 1.78
USF3-203ENST00000491165 TRPM7Q96QT4 1865 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 NF2P35240 595 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 TMTC2Q8N394 836 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 ZNF784Q8NCA9 323 aaPredicted RBP26.17■■□□□ 1.78
USF3-203ENST00000491165 CLMNQ96JQ2 1002 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 KAT14Q9H8E8 782 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 CDC27P30260 824 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 GTF2F1P35269 517 aaKnown RBP eCLIP26.17■■□□□ 1.78
USF3-203ENST00000491165 CST9Q5W186 159 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 NSUN7Q8NE18 718 aaKnown RBP26.17■■□□□ 1.78
USF3-203ENST00000491165 FAM217BQ9NTX9 383 aaPredicted RBP26.17■■□□□ 1.78
USF3-203ENST00000491165 NYAP2Q9P242 653 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 KIF3AQ9Y496 699 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 SNCAIPQ9Y6H5 919 aa26.17■■□□□ 1.78
USF3-203ENST00000491165 TTLL12Q14166 644 aaPredicted RBP26.16■■□□□ 1.78
USF3-203ENST00000491165 CCDC178Q5BJE1 867 aa26.16■■□□□ 1.78
USF3-203ENST00000491165 NUP133Q8WUM0 1156 aa26.16■■□□□ 1.78
USF3-203ENST00000491165 CNKSR2Q8WXI2 1034 aa26.16■■□□□ 1.78
USF3-203ENST00000491165 ZBTB43O43298 467 aa26.15■■□□□ 1.78
USF3-203ENST00000491165 PPFIA3O75145 1194 aa26.15■■□□□ 1.78
USF3-203ENST00000491165 TOP1P11387 765 aaKnown RBP26.15■■□□□ 1.78
USF3-203ENST00000491165 PTPRAP18433 802 aa26.15■■□□□ 1.78
USF3-203ENST00000491165 CELF2O95319 508 aaKnown RBP26.15■■□□□ 1.78
USF3-203ENST00000491165 CAVIN2O95810 425 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 756.9 ms