RNA–Protein interactions for RNA: ENST00000491066.1

PLXNA3-206, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-206ENST00000491066 ICA1Q05084 483 aa22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 SYMPKQ92797 1274 aaKnown RBP22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 DYNLL2Q96FJ2 89 aa22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 CCDC17Q96LX7 622 aa22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 MMP19Q99542 508 aa22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 TINF2Q9BSI4 451 aa22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 PRDM6Q9NQX0 595 aa22.48■■□□□ 1.19
PLXNA3-206ENST00000491066 NAV1Q8NEY1 1877 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 PGK1P00558 417 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 RLBP1P12271 317 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 AKR1B1P15121 316 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 RAG1P15918 1043 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 ZNF792Q3KQV3 632 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 RIOX2Q8IUF8 465 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 LCORLQ8N3X6 602 aa22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.47■■□□□ 1.19
PLXNA3-206ENST00000491066 A0A1W2PQ45 241 aaPredicted RBP22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 A0A1W2PQY0 241 aa22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 PGK2P07205 417 aa22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 HSP90AB4PQ58FF6 505 aa22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 CLEC10AQ8IUN9 316 aa22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 TOX2Q96NM4 488 aa22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 TSEN34Q9BSV6 310 aaKnown RBP22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 ATP8A2Q9NTI2 1148 aa22.46■■□□□ 1.19
PLXNA3-206ENST00000491066 ZNF865P0CJ78 1059 aaPredicted RBP22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 AKR1A1P14550 325 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 TAL1P17542 331 aaPredicted RBP22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 FPGSQ05932 587 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 KCTD2Q14681 263 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 SAMD1Q6SPF0 538 aaPredicted RBP22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 ANKRD33Q7Z3H0 272 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 RHPN1Q8TCX5 695 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 IL1RAPL2Q9NP60 686 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 TMEM39AQ9NV64 488 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 ROBO3Q96MS0 1386 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 SMCHD1A6NHR9 2005 aa22.45■■□□□ 1.18
PLXNA3-206ENST00000491066 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 GOLIM4O00461 696 aa22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 PQBP1O60828 265 aaKnown RBP22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 STAT3P40763 770 aa22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 ARMT1Q9H993 441 aa22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 ZNFX1Q9P2E3 1918 aaKnown RBP22.44■■□□□ 1.18
PLXNA3-206ENST00000491066 VWA5AO00534 786 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 ADAMTS4O75173 837 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 COPB2P35606 906 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 CDK8P49336 464 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 FAAP100Q0VG06 881 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 C12orf60Q5U649 245 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 CLASRPQ8N2M8 674 aaKnown RBP22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 KANSL2Q9H9L4 492 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 FBXO28Q9NVF7 368 aa22.43■■□□□ 1.18
PLXNA3-206ENST00000491066 PRKAB2O43741 272 aa22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 EEF2P13639 858 aaKnown RBP22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 GRIN2CQ14957 1233 aa22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 NUP133Q8WUM0 1156 aa22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 ZNF214Q9UL59 606 aaPredicted RBP22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 PPP1R9AQ9ULJ8 1098 aa22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 CNPY2Q9Y2B0 182 aa22.42■■□□□ 1.18
PLXNA3-206ENST00000491066 DCDC2CA8MYV0 355 aa22.41■■□□□ 1.18
PLXNA3-206ENST00000491066 DNAJB2P25686 324 aa22.41■■□□□ 1.18
PLXNA3-206ENST00000491066 ACLYP53396 1101 aa22.41■■□□□ 1.18
PLXNA3-206ENST00000491066 C16orf86Q6ZW13 317 aa22.41■■□□□ 1.18
PLXNA3-206ENST00000491066 REPS2Q8NFH8 660 aa22.41■■□□□ 1.18
PLXNA3-206ENST00000491066 MOXD2PA6NHM9 499 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 ADD2P35612 726 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 AMOTL1Q8IY63 956 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 KLHDC9Q8NEP7 349 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 KIF1BPQ96EK5 621 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 GOPCQ9HD26 462 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 STARD7Q9NQZ5 370 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 PARP14Q460N5 1801 aa22.4■■□□□ 1.18
PLXNA3-206ENST00000491066 CYP2D7A0A087X1C5 515 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 USP17L12C9JPN9 530 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 USP17L21D6R901 530 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 SMIM22K7EJ46 135 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 MBD4O95243 580 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 TIMP1P01033 207 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 IFIT2P09913 472 aaKnown RBP22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 TJAP1Q5JTD0 557 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 CCSAPQ6IQ19 270 aaPredicted RBP22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 LENG1Q96BZ8 264 aaPredicted RBP22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 ZNF576Q9H609 170 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 FAM184BQ9ULE4 1060 aa22.39■■□□□ 1.17
PLXNA3-206ENST00000491066 SYNGAP1Q96PV0 1343 aa22.38■■□□□ 1.17
PLXNA3-206ENST00000491066 SYNRGQ9UMZ2 1314 aa22.38■■□□□ 1.17
PLXNA3-206ENST00000491066 KCNA10Q16322 511 aa22.38■■□□□ 1.17
PLXNA3-206ENST00000491066 SLFNL1Q499Z3 407 aa22.38■■□□□ 1.17
PLXNA3-206ENST00000491066 MAMDC4Q6UXC1 1216 aa22.38■■□□□ 1.17
PLXNA3-206ENST00000491066 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
PLXNA3-206ENST00000491066 COL11A1P12107 1806 aaPredicted RBP22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 SNAI1O95863 264 aaPredicted RBP22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 FAM83BQ5T0W9 1011 aa22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 MFSD5Q6N075 450 aa22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 USP38Q8NB14 1042 aa22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 TIFAQ96CG3 184 aa22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 DDRGK1Q96HY6 314 aa22.37■■□□□ 1.17
PLXNA3-206ENST00000491066 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.37■■□□□ 1.171e-6■■■□□ 16.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms