RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	AKR1B1	P15121	316 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	RNF180	Q86T96	592 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	SIAH1	Q8IUQ4	282 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	RHPN1	Q8TCX5	695 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	MYLIP	Q8WY64	445 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	CCDC17	Q96LX7	622 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	IL1RAPL2	Q9NP60	686 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	TACC3	Q9Y6A5	838 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	CDH23	Q9H251	3354 aa		18.43	■□□□□ 0.54
AGAP3-222	ENST00000490839	GOLIM4	O00461	696 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	FOSL2	P15408	326 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	TMEM132B	Q14DG7	1078 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	DYNLL2	Q96FJ2	89 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	RNPC3	Q96LT9	517 aa	Known RBP	18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	MMP19	Q99542	508 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	DNAJC2	Q99543	621 aa	Known RBP	18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	ATP8A2	Q9NTI2	1148 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	ADAMTS5	Q9UNA0	930 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	PRUNE2	Q8WUY3	3088 aa		18.42	■□□□□ 0.54
AGAP3-222	ENST00000490839	KIAA0355	O15063	1070 aa		18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	KCTD2	Q14681	263 aa		18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	RIOX2	Q8IUF8	465 aa		18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	CLASRP	Q8N2M8	674 aa	Known RBP	18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	TINF2	Q9BSI4	451 aa		18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	ARMT1	Q9H993	441 aa		18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	DIS3	Q9Y2L1	958 aa	Known RBP	18.41	■□□□□ 0.54
AGAP3-222	ENST00000490839	PGK2	P07205	417 aa		18.4	■□□□□ 0.54
AGAP3-222	ENST00000490839	ITGB8	P26012	769 aa		18.4	■□□□□ 0.54
AGAP3-222	ENST00000490839	COPB2	P35606	906 aa		18.4	■□□□□ 0.54
AGAP3-222	ENST00000490839	AMOTL1	Q8IY63	956 aa		18.4	■□□□□ 0.54
AGAP3-222	ENST00000490839		A0A1W2PQ45	241 aa	Predicted RBP	18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839		A0A1W2PQY0	241 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	MBD4	O95243	580 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	PGK1	P00558	417 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	AKR1A1	P14550	325 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	RAG1	P15918	1043 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	CDK8	P49336	464 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	FPGS	Q05932	587 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	ZNF792	Q3KQV3	632 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	KIF1BP	Q96EK5	621 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	CNPY2	Q9Y2B0	182 aa		18.39	■□□□□ 0.53
AGAP3-222	ENST00000490839	VWA5A	O00534	786 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	PRKAB2	O43741	272 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	PQBP1	O60828	265 aa	Known RBP	18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	IFIT2	P09913	472 aa	Known RBP	18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	EEF2	P13639	858 aa	Known RBP	18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	ADD2	P35612	726 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	STAT3	P40763	770 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	EPHB4	P54760	987 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	C12orf60	Q5U649	245 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	C16orf86	Q6ZW13	317 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	TOX2	Q96NM4	488 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	KANSL2	Q9H9L4	492 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	GOPC	Q9HD26	462 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	FBXO28	Q9NVF7	368 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	ZNF214	Q9UL59	606 aa	Predicted RBP	18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	PPP1R9A	Q9ULJ8	1098 aa		18.38	■□□□□ 0.53
AGAP3-222	ENST00000490839	ADAMTS4	O75173	837 aa		18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	TAL1	P17542	331 aa	Predicted RBP	18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	ANKRD33	Q7Z3H0	272 aa		18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	MSL3	Q8N5Y2	521 aa	Known RBP	18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	SYMPK	Q92797	1274 aa	Known RBP	18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	DDRGK1	Q96HY6	314 aa		18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	TSEN34	Q9BSV6	310 aa	Known RBP	18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.37	■□□□□ 0.53	2e-9	■■■■■ 29.8
AGAP3-222	ENST00000490839	TMEM39A	Q9NV64	488 aa		18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	PAG1	Q9NWQ8	432 aa		18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	MYH7	P12883	1935 aa		18.37	■□□□□ 0.53
AGAP3-222	ENST00000490839	CYP2D7	A0A087X1C5	515 aa		18.36	■□□□□ 0.53
AGAP3-222	ENST00000490839	REPS2	Q8NFH8	660 aa		18.36	■□□□□ 0.53
AGAP3-222	ENST00000490839	LENG1	Q96BZ8	264 aa	Predicted RBP	18.36	■□□□□ 0.53
AGAP3-222	ENST00000490839	GREB1L	Q9C091	1923 aa	Predicted RBP	18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	ZBED9	Q6R2W3	1325 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	SYNGAP1	Q96PV0	1343 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	SYNRG	Q9UMZ2	1314 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	MOXD2P	A6NHM9	499 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	DCDC2C	A8MYV0	355 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	USP17L12	C9JPN9	530 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	USP17L21	D6R901	530 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	SMIM22	K7EJ46	135 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	APBB1	O00213	710 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	ACLY	P53396	1101 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	FAM83B	Q5T0W9	1011 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	NUP133	Q8WUM0	1156 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	PRDM6	Q9NQX0	595 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	STARD7	Q9NQZ5	370 aa		18.35	■□□□□ 0.53
AGAP3-222	ENST00000490839	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	DNAJB2	P25686	324 aa		18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	FAAP100	Q0VG06	881 aa		18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	PANK1	Q8TE04	598 aa		18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	TEX13B	Q9BXU2	312 aa		18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	FAM184B	Q9ULE4	1060 aa		18.34	■□□□□ 0.53
AGAP3-222	ENST00000490839	RAD21	O60216	631 aa		18.33	■□□□□ 0.52
AGAP3-222	ENST00000490839	HMMR	O75330	724 aa		18.33	■□□□□ 0.52
AGAP3-222	ENST00000490839	ATP5J	P18859	108 aa		18.33	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms