RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PAK2Q13177 524 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 CFAP221Q4G0U5 840 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 KCNB2Q92953 911 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 CHP1Q99653 195 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 GUCY1A2P33402 732 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 UBE4AQ14139 1066 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 DNAJC10Q8IXB1 793 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TRIM58Q8NG06 486 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TUBGCP2Q9BSJ2 902 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
SHOX2-205ENST00000490689 GREM2Q9H772 168 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
SHOX2-205ENST00000490689 TRIM49BA6NDI0 452 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 NCAPHQ15003 741 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 SEPT7Q16181 437 aaKnown RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 MB21D2Q8IYB1 491 aaPredicted RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 PAIP2Q9BPZ3 127 aaKnown RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 ALKQ9UM73 1620 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 MLH3Q9UHC1 1453 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 H7C1D1 291 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 CALM1P0DP23 149 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 CALM2P0DP24 149 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 CALM3P0DP25 149 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 KCNJ6P48051 423 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 DNM2P50570 870 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 PUM3Q15397 648 aaKnown RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 ABHD10Q9NUJ1 306 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 GCOM1H8Y6P7 765 aaPredicted RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 MPHOSPH10O00566 681 aaKnown RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 MYZAPP0CAP1 466 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 TRIM65Q6PJ69 517 aa14.29□□□□□ -0.12
SHOX2-205ENST00000490689 FOXP1Q9H334 677 aaPredicted RBP14.29□□□□□ -0.12
SHOX2-205ENST00000490689 RPSAP08865 295 aaKnown RBP14.28□□□□□ -0.12
SHOX2-205ENST00000490689 IFNAR1P17181 557 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 RASSF7Q02833 373 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 KRT71Q3SY84 523 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 FOXR1Q6PIV2 292 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 MMS22LQ6ZRQ5 1243 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 NUP58Q9BVL2 599 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 EPB41L5Q9HCM4 733 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 CD163L1Q9NR16 1453 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
SHOX2-205ENST00000490689 MOCS3O95396 460 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 TNNI2P48788 182 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 PPARAQ07869 468 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 SLC39A2Q9NP94 309 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 ARHGAP31Q2M1Z3 1444 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 ANKRD62A6NC57 917 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 TMEM110-MUSTN1A8MSY1 372 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 CCNT1O60563 726 aaKnown RBP14.28□□□□□ -0.12
SHOX2-205ENST00000490689 BCAMP50895 628 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 FBXW10Q5XX13 1052 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 SYNE4Q8N205 404 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
SHOX2-205ENST00000490689 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
SHOX2-205ENST00000490689 FAM205CA6NFA0 338 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 GOLGA8KD6RF30 607 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 ATP1A1P05023 1023 aaKnown RBP14.27□□□□□ -0.12
SHOX2-205ENST00000490689 EHHADHQ08426 723 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 INF2Q27J81 1249 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 DZIP3Q86Y13 1208 aaKnown RBP14.27□□□□□ -0.12
SHOX2-205ENST00000490689 NELFCDQ8IXH7 590 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 UHMK1Q8TAS1 419 aaKnown RBP14.27□□□□□ -0.12
SHOX2-205ENST00000490689 MYO1AQ9UBC5 1043 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 HYOU1Q9Y4L1 999 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 NRXN1Q9ULB1 1477 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 ZNF185O15231 689 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 ZNF76P36508 570 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 NNTQ13423 1086 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 TCIRG1Q13488 830 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 CUL4BQ13620 913 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 MMS19Q96T76 1030 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 KRT12Q99456 494 aa14.27□□□□□ -0.12
SHOX2-205ENST00000490689 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.12
SHOX2-205ENST00000490689 PIH1D3Q9NQM4 214 aaKnown RBP14.27□□□□□ -0.12
SHOX2-205ENST00000490689 KIAA1210Q9ULL0 1709 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 ESYT3A0FGR9 886 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 USP17L12C9JPN9 530 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 USP17L21D6R901 530 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 ADD2P35612 726 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 ADAT2Q7Z6V5 191 aaKnown RBP14.27□□□□□ -0.13
SHOX2-205ENST00000490689 TBC1D31Q96DN5 1066 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 TACO1Q9BSH4 297 aaKnown RBP14.27□□□□□ -0.13
SHOX2-205ENST00000490689 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.13
SHOX2-205ENST00000490689 CYP2D7A0A087X1C5 515 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 TTC26A0AVF1 554 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 CTNNA1P35221 906 aaKnown RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 CCDC152Q4G0S7 254 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 MUM1L1Q5H9M0 696 aa14.26□□□□□ -0.13
SHOX2-205ENST00000490689 DCAF17Q5H9S7 520 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-205ENST00000490689 SV2BQ7L1I2 683 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms