RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 CHD2O14647 1828 aaKnown RBP6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 ATP10DQ9P241 1426 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 SLIT1O75093 1534 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 MEIS3P2A8K0S8 358 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 UPK3BL1B0FP48 263 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 UPK3BL2E5RIL1 263 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 DLL1O00548 723 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 PDPK1O15530 556 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 GDF11O95390 407 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 RAG1P15918 1043 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 HOXB4P17483 251 aaPredicted RBP6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 TCEAL1Q15170 157 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 GGT6Q6P531 493 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 DYMQ7RTS9 669 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 FAM13CQ8NE31 585 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 TRIM11Q96F44 468 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 SCARF2Q96GP6 870 aaPredicted RBP6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 PLVAPQ9BX97 442 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 CCDC113Q9H0I3 377 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 ENAMQ9NRM1 1142 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 PCDHB10Q9UN67 800 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 TNRC18O15417 2968 aaPredicted RBP6.97□□□□□ -1.29
SSX2IP-208ENST00000490476 RNGTTO60942 597 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 ACRP10323 421 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 HCLS1P14317 486 aaPredicted RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 DRD2P14416 443 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 POLR2BP30876 1174 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 ERVK-24P63145 666 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 SNRPNP63162 240 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 TRIM28Q13263 835 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 EZH2Q15910 746 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 MTERF2Q49AM1 385 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 ZBTB37Q5TC79 503 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 UNC5AQ6ZN44 842 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 C19orf47Q8N9M1 422 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 C12orf50Q8NA57 414 aaPredicted RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 LRRC59Q96AG4 307 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 ACSF2Q96CM8 615 aaPredicted RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 RNPC3Q96LT9 517 aaKnown RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 SLC9A7Q96T83 725 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 DPH2Q9BQC3 489 aaPredicted RBP6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 PFDN2Q9UHV9 154 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 MSRB2Q9Y3D2 182 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 TACC3Q9Y6A5 838 aa6.96□□□□□ -1.3
SSX2IP-208ENST00000490476 COL22A1Q8NFW1 1626 aaPredicted RBP6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 PPM1GO15355 546 aaPredicted RBP6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 TMEM201Q5SNT2 666 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 VHLLQ6RSH7 139 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 KIAA1211Q6ZU35 1233 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 BRINP3Q76B58 766 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 CDC37L1Q7L3B6 337 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 LRP10Q7Z4F1 713 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 PHACTR4Q8IZ21 702 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 LILRB2Q8N423 598 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 FANCD2OSQ96PS1 177 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 TMPRSS13Q9BYE2 586 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 RNF208Q9H0X6 261 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 SSU72Q9NP77 194 aaKnown RBP6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 DISC1Q9NRI5 854 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 FAM86C1Q9NVL1 165 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 CRIM1Q9NZV1 1036 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 TJP2Q9UDY2 1190 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 ADAM30Q9UKF2 790 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 CFAP65Q6ZU64 1925 aaKnown RBP6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 SBNO2Q9Y2G9 1366 aa6.95□□□□□ -1.3
SSX2IP-208ENST00000490476 FANCGO15287 622 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 CLSTN1O94985 981 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 ADH5P11766 374 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 NCLP19338 710 aaKnown RBP6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 TTLL4Q14679 1199 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 EGFLAMQ63HQ2 1017 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 KRT27Q7Z3Y8 459 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 AGGF1Q8N302 714 aaeCLIP6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 ZNF507Q8TCN5 953 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 SH3TC2Q8TF17 1288 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 TMEM87BQ96K49 555 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 SYT17Q9BSW7 474 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 KANSL2Q9H9L4 492 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 FBRSQ9HAH7 460 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 PIDD1Q9HB75 910 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 SLC12A7Q9Y666 1083 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 LTBP3Q9NS15 1303 aa6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 INO80Q9ULG1 1556 aaPredicted RBP6.94□□□□□ -1.3
SSX2IP-208ENST00000490476 CROCC2H7BZ55 1655 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 SPDYE3A6NKU9 549 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 LTKP29376 864 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 ASPAP45381 313 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 YARSP54577 528 aaKnown RBP6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 RING1Q06587 406 aa6.93□□□□□ -1.3
SSX2IP-208ENST00000490476 RASGRF1Q13972 1273 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms