RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 RXRBP28702 533 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 GABPAQ06546 454 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 PTGDRQ13258 359 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
SNX5-214ENST00000490175 SMARCE1Q969G3 411 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 DACH1Q9UI36 760 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 C10orf71Q711Q0 1435 aa18.34■□□□□ 0.53
SNX5-214ENST00000490175 M0R2N6 131 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 CYTH3O43739 400 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 NOM1Q5C9Z4 860 aaKnown RBP18.33■□□□□ 0.53
SNX5-214ENST00000490175 SPATA20Q8TB22 786 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 CCDC12Q8WUD4 166 aaPredicted RBP18.33■□□□□ 0.53
SNX5-214ENST00000490175 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.539e-6■■□□□ 14.5
SNX5-214ENST00000490175 CEP95Q96GE4 821 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 IMPACTQ9P2X3 320 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 SWAP70Q9UH65 585 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 MYH8P13535 1937 aa18.33■□□□□ 0.53
SNX5-214ENST00000490175 WNT7AO00755 349 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 SLFN14P0C7P3 912 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
SNX5-214ENST00000490175 DHX8Q14562 1220 aaKnown RBP18.33■□□□□ 0.52
SNX5-214ENST00000490175 DOK7Q18PE1 504 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 SLC35G1Q2M3R5 365 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 WWC2Q6AWC2 1192 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 ISM2Q6H9L7 571 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 USP49Q70CQ1 688 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 MLKLQ8NB16 471 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 SYMPKQ92797 1274 aaKnown RBP18.33■□□□□ 0.52
SNX5-214ENST00000490175 TEKT1Q969V4 418 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 MRIQ9BWK5 157 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 MAN1B1Q9UKM7 699 aa18.33■□□□□ 0.52
SNX5-214ENST00000490175 STXBP3O00186 592 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 FOXN1O15353 648 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 SMC2O95347 1197 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 GSDMDP57764 484 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.521e-8■■■□□ 18.4
SNX5-214ENST00000490175 USP40Q9NVE5 1235 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 F8W031 263 aaPredicted RBP18.32■□□□□ 0.52
SNX5-214ENST00000490175 H0YIN7 160 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 RBM10P98175 930 aaKnown RBP18.32■□□□□ 0.52
SNX5-214ENST00000490175 PICALMQ13492 652 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 MORC3Q14149 939 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 CT47A1Q5JQC4 288 aaPredicted RBP18.32■□□□□ 0.52
SNX5-214ENST00000490175 PDILTQ8N807 584 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 EPSTI1Q96J88 318 aa18.32■□□□□ 0.52
SNX5-214ENST00000490175 CCDC194A0A1B0GVG4 234 aa18.31■□□□□ 0.52
SNX5-214ENST00000490175 HEATR3Q7Z4Q2 680 aa18.31■□□□□ 0.52
SNX5-214ENST00000490175 SH3RF1Q7Z6J0 888 aa18.31■□□□□ 0.52
SNX5-214ENST00000490175 LRRC8AQ8IWT6 810 aa18.31■□□□□ 0.52
SNX5-214ENST00000490175 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
SNX5-214ENST00000490175 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
SNX5-214ENST00000490175 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
SNX5-214ENST00000490175 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
SNX5-214ENST00000490175 VWA3AA6NCI4 1184 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 PRR29P0C7W0 189 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 BMP6P22004 513 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 DNTTIP2Q5QJE6 756 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 TYW1BQ6NUM6 668 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 DHX58Q96C10 678 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 XPO4Q9C0E2 1151 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 ZMYND12Q9H0C1 365 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 HSD3B7Q9H2F3 369 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 IFNKQ9P0W0 207 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 PCDHA6Q9UN73 950 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 PCDHA8Q9Y5H6 950 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 CBFA2T2O43439 604 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 MCM7P33993 719 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 LONP1P36776 959 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 HDLBPQ00341 1268 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 LRMPQ12912 555 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 CDC42EP5Q6NZY7 148 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
SNX5-214ENST00000490175 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
SNX5-214ENST00000490175 A0A087X0B3 334 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 GOLGA8HP0CJ92 632 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 FANCCQ00597 558 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 ASPRV1Q53RT3 343 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 PPP4R3BQ5MIZ7 849 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 STRIP1Q5VSL9 837 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 APOBEC3HQ6NTF7 200 aaKnown RBP18.29■□□□□ 0.52
SNX5-214ENST00000490175 C17orf53Q8N3J3 647 aaPredicted RBP18.29■□□□□ 0.52
SNX5-214ENST00000490175 ZDHHC15Q96MV8 337 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 MTMR7Q9Y216 660 aa18.29■□□□□ 0.52
SNX5-214ENST00000490175 LAD1O00515 517 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 ADAMTS3O15072 1205 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 LMOD1P29536 600 aaPredicted RBP18.28■□□□□ 0.52
SNX5-214ENST00000490175 GNA11P29992 359 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 SCNN1DP51172 638 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 C4orf32Q8N8J7 132 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 IQUBQ8NA54 791 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms