RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 RNF34Q969K3 372 aa6.65□□□□□ -1.34
HMGN1-218ENST00000490032 EBF1Q9UH73 591 aa6.65□□□□□ -1.34
HMGN1-218ENST00000490032 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 IMPDH2P12268 514 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 RACK1P63244 317 aaKnown RBP6.64□□□□□ -1.35
HMGN1-218ENST00000490032 DUSP4Q13115 394 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 SNW1Q13573 536 aaKnown RBP6.64□□□□□ -1.35
HMGN1-218ENST00000490032 PKN1Q16512 942 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 SYTL4Q96C24 671 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-218ENST00000490032 TCTN2Q96GX1 697 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 SLC9A7Q96T83 725 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 G6PC3Q9BUM1 346 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 DDX41Q9UJV9 622 aaKnown RBP6.64□□□□□ -1.35
HMGN1-218ENST00000490032 PCDHGB7Q9Y5F8 929 aa6.64□□□□□ -1.35
HMGN1-218ENST00000490032 SCAMP3O14828 347 aaKnown RBP6.63□□□□□ -1.35
HMGN1-218ENST00000490032 TSPAN15O95858 294 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 TRHRP34981 398 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-218ENST00000490032 CHRNEQ04844 493 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 SPPL2CQ8IUH8 684 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 TAB3Q8N5C8 712 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-218ENST00000490032 ANKS4BQ8N8V4 417 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 FBXO15Q8NCQ5 510 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-218ENST00000490032 LINC00116Q8NCU8 138 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 SLC6A18Q96N87 628 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 PPP1R16BQ96T49 567 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 PRDM14Q9GZV8 571 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 RNF32Q9H0A6 362 aa6.63□□□□□ -1.35
HMGN1-218ENST00000490032 NSUN3Q9H649 340 aaKnown RBP6.63□□□□□ -1.35
HMGN1-218ENST00000490032 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 PRAMEF1O95521 474 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 ACRP10323 421 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 SNX17Q15036 470 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 TIGD5Q53EQ6 642 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 CILP2Q8IUL8 1156 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 RBBP8NLQ8NC74 664 aaPredicted RBP6.62□□□□□ -1.35
HMGN1-218ENST00000490032 ZNF512BQ96KM6 892 aaPredicted RBP6.62□□□□□ -1.35
HMGN1-218ENST00000490032 C19orf44Q9H6X5 657 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
HMGN1-218ENST00000490032 KRT1P04264 644 aa6.61□□□□□ -1.35
HMGN1-218ENST00000490032 PCBP3P57721 371 aaKnown RBP6.61□□□□□ -1.35
HMGN1-218ENST00000490032 BBS9Q3SYG4 887 aa6.61□□□□□ -1.35
HMGN1-218ENST00000490032 SYDE1Q6ZW31 735 aaPredicted RBP6.61□□□□□ -1.35
HMGN1-218ENST00000490032 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
HMGN1-218ENST00000490032 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
HMGN1-218ENST00000490032 FOXP3Q9BZS1 431 aa6.61□□□□□ -1.35
HMGN1-218ENST00000490032 EPB41L4BQ9H329 900 aa6.61□□□□□ -1.35
HMGN1-218ENST00000490032 CWC22Q9HCG8 908 aaKnown RBP6.61□□□□□ -1.35
HMGN1-218ENST00000490032 TCFL5Q9UL49 500 aa6.61□□□□□ -1.35
HMGN1-218ENST00000490032 TMEM82A0PJX8 343 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 NOTOA8MTQ0 251 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 IRF2BP1Q8IU81 584 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 DHRS1Q96LJ7 313 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 TM9SF2Q99805 663 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 MKRN2Q9H000 416 aaKnown RBP6.6□□□□□ -1.35
HMGN1-218ENST00000490032 DCP1AQ9NPI6 582 aaPredicted RBP6.6□□□□□ -1.35
HMGN1-218ENST00000490032 CHST7Q9NS84 486 aa6.6□□□□□ -1.35
HMGN1-218ENST00000490032 SUCOQ9UBS9 1254 aaKnown RBP6.6□□□□□ -1.35
HMGN1-218ENST00000490032 YBX2Q9Y2T7 364 aaKnown RBP6.6□□□□□ -1.35
HMGN1-218ENST00000490032 RPL10P27635 214 aaKnown RBP6.59□□□□□ -1.35
HMGN1-218ENST00000490032 KIR2DL1P43626 348 aaPredicted RBP6.59□□□□□ -1.35
HMGN1-218ENST00000490032 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
HMGN1-218ENST00000490032 RAP1GAPP47736 663 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 AUHQ13825 339 aaKnown RBP6.59□□□□□ -1.35
HMGN1-218ENST00000490032 COL9A2Q14055 689 aaPredicted RBP6.59□□□□□ -1.35
HMGN1-218ENST00000490032 WAPLQ7Z5K2 1190 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 ZNF654Q8IZM8 581 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 MAP6Q96JE9 813 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 FERD3LQ96RJ6 166 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 SLC6A17Q9H1V8 727 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 PCDHB12Q9Y5F1 795 aa6.59□□□□□ -1.35
HMGN1-218ENST00000490032 PSPNO60542 156 aa6.58□□□□□ -1.36
HMGN1-218ENST00000490032 SYPP08247 313 aa6.58□□□□□ -1.36
HMGN1-218ENST00000490032 PMS1P54277 932 aaKnown RBP6.58□□□□□ -1.36
HMGN1-218ENST00000490032 SMARCC1Q92922 1105 aaPredicted RBP6.58□□□□□ -1.36
HMGN1-218ENST00000490032 INTS4Q96HW7 963 aaKnown RBP6.58□□□□□ -1.36
HMGN1-218ENST00000490032 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
HMGN1-218ENST00000490032 KCNK12Q9HB15 430 aa6.58□□□□□ -1.36
HMGN1-218ENST00000490032 MINPP1Q9UNW1 487 aa6.58□□□□□ -1.36
HMGN1-218ENST00000490032 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 SSU72P8A0A1W2PR75 194 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 C9IYK1 514 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 SHOXO15266 292 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 NRDCO43847 1150 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 MED14OSP0DP75 135 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 BMP8BP34820 402 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 CTSKP43235 329 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 TRIM26Q12899 539 aaPredicted RBP6.57□□□□□ -1.36
HMGN1-218ENST00000490032 PAK2Q13177 524 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 NLRX1Q86UT6 975 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 C7orf61Q8IZ16 206 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 HHIPL1Q96JK4 782 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 SLC26A8Q96RN1 970 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 GFOD1Q9NXC2 390 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 GPR160Q9UJ42 338 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 ZMYM5Q9UJ78 669 aa6.57□□□□□ -1.36
HMGN1-218ENST00000490032 PPT2Q9UMR5 302 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms