RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 PRKAB2O43741 272 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 CDK8P49336 464 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 KIAA1755Q5JYT7 1200 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 FERMT2Q96AC1 680 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 MAML3Q96JK9 1138 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 XPNPEP3Q9NQH7 507 aa12.49□□□□□ -0.41
CHKB-211ENST00000489453 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 CYP2D7A0A087X1C5 515 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 USP17L12C9JPN9 530 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 USP17L21D6R901 530 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 ATP5JP18859 108 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 COPB2P35606 906 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 TMEM132BQ14DG7 1078 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 LRRC41Q15345 812 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 C16orf86Q6ZW13 317 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 RNF180Q86T96 592 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 KANSL2Q9H9L4 492 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 NRBP1Q9UHY1 535 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 CTDP1Q9Y5B0 961 aaPredicted RBP12.48□□□□□ -0.41
CHKB-211ENST00000489453 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
CHKB-211ENST00000489453 GREB1LQ9C091 1923 aaPredicted RBP12.48□□□□□ -0.41
CHKB-211ENST00000489453 LAMA2P24043 3122 aaKnown RBP12.48□□□□□ -0.41
CHKB-211ENST00000489453 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 IGHA2P01877 340 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
CHKB-211ENST00000489453 STAT3P40763 770 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHKB-211ENST00000489453 BADQ92934 168 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 HAUS7Q99871 368 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 PDLIM7Q9NR12 457 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 ARPP21Q9UBL0 812 aaPredicted RBP12.47□□□□□ -0.41
CHKB-211ENST00000489453 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
CHKB-211ENST00000489453 VWA5AO00534 786 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 PGK2P07205 417 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 SNX17Q15036 470 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 SHHQ15465 462 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 FAM83BQ5T0W9 1011 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 RIOX2Q8IUF8 465 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 SIAH1Q8IUQ4 282 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
CHKB-211ENST00000489453 UNC80Q8N2C7 3258 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 PQBP1O60828 265 aaKnown RBP12.45□□□□□ -0.42
CHKB-211ENST00000489453 PGK1P00558 417 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 CLTBP09497 229 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 AKR1A1P14550 325 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 SLC4A3P48751 1232 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 TLE2Q04725 743 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 C9orf50Q5SZB4 431 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 MIER1Q8N108 512 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 LRRCC1Q9C099 1032 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 ZBTB40Q9NUA8 1239 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 DIS3Q9Y2L1 958 aaKnown RBP12.45□□□□□ -0.42
CHKB-211ENST00000489453 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
CHKB-211ENST00000489453 ROBO3Q96MS0 1386 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 RAG1P15918 1043 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 SMAD3P84022 425 aaKnown RBP12.44□□□□□ -0.42
CHKB-211ENST00000489453 ZNF792Q3KQV3 632 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 C1orf53Q5VUE5 145 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 SNRNP48Q6IEG0 339 aaKnown RBP12.44□□□□□ -0.42
CHKB-211ENST00000489453 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 SH3RF1Q7Z6J0 888 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 TRIM43Q96BQ3 446 aaPredicted RBP12.44□□□□□ -0.42
CHKB-211ENST00000489453 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
CHKB-211ENST00000489453 TEX13BQ9BXU2 312 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 ADAMTS5Q9UNA0 930 aa12.44□□□□□ -0.42
CHKB-211ENST00000489453 A0A1W2PQ45 241 aaPredicted RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 A0A1W2PQY0 241 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 CHGBP05060 677 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 MAFAQ8NHW3 353 aaPredicted RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 NUP133Q8WUM0 1156 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 NUP88Q99567 741 aaPredicted RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 CDX2Q99626 313 aaPredicted RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 PUS7LQ9H0K6 701 aaKnown RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 STARD7Q9NQZ5 370 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 TMEM39AQ9NV64 488 aa12.43□□□□□ -0.42
CHKB-211ENST00000489453 ZHX1Q9UKY1 873 aaPredicted RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms