RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TTLL11Q8NHH1 800 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 RTKNQ9BST9 563 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 WNT8AQ9H1J5 351 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 HIPK3Q9H422 1215 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 CWC22Q9HCG8 908 aaKnown RBP9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 ROBO3Q96MS0 1386 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 LAMA5O15230 3695 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 LCHNA4D1U4 455 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 MOXD2PA6NHM9 499 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 ADAMTS4O75173 837 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 CD4P01730 458 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 RING1Q06587 406 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 SMAD4Q13485 552 aaKnown RBP9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 PRAMEF19Q5SWL8 479 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 EP400NLQ6ZTU2 488 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 CYP2W1Q8TAV3 490 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 HAUS7Q99871 368 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 MRIQ9BWK5 157 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 LHX6Q9UPM6 363 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 ELP1O95163 1332 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 RFX7Q2KHR2 1363 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 CNOT1A5YKK6 2376 aaKnown RBP9.72□□□□□ -0.85
EXOSC3-206ENST00000489414 ITPR1Q14643 2758 aa9.71□□□□□ -0.85
EXOSC3-206ENST00000489414 KRT38O76015 456 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 CCL23P55773 120 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 NFIAQ12857 509 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 TIGD5Q53EQ6 642 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 ZNF280CQ8ND82 737 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 JARID2Q92833 1246 aaPredicted RBP9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 MRPL38Q96DV4 380 aaKnown RBP9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 PAGR1Q9BTK6 254 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 CLDND1Q9NY35 253 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 CDV3Q9UKY7 258 aaKnown RBP9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 HECTD1Q9ULT8 2610 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 MYO7AQ13402 2215 aa9.71□□□□□ -0.86
EXOSC3-206ENST00000489414 IGSF10Q6WRI0 2623 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 ARVCFO00192 962 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 TLR3O15455 904 aaKnown RBP9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 PFKMP08237 780 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 ERVK-21P61565 698 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 SHC2P98077 582 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 CLUL1Q15846 466 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 SOWAHCQ53LP3 525 aaPredicted RBP9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 PPM1JQ5JR12 505 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 CCSAPQ6IQ19 270 aaPredicted RBP9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 PANK3Q9H999 370 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 FAM198AQ9UFP1 575 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 TRIM35Q9UPQ4 493 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 ATAD5Q96QE3 1844 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 FANCMQ8IYD8 2048 aa9.7□□□□□ -0.86
EXOSC3-206ENST00000489414 DMXL2Q8TDJ6 3036 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 TAF5LO75529 589 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 CNMDO75829 334 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 ICAM3P32942 547 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 DLX2Q07687 328 aaPredicted RBP9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 ANGPT1Q15389 498 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 CTC1Q2NKJ3 1217 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 TCEAL5Q5H9L2 206 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 RPAINQ86UA6 219 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 TGS1Q96RS0 853 aaKnown RBP9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 TBC1D2Q9BYX2 928 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 IVNS1ABPQ9Y6Y0 642 aa9.69□□□□□ -0.86
EXOSC3-206ENST00000489414 SCN5AQ14524 2016 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 A0A0U1RQG5 324 aaPredicted RBP9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 PRR5-ARHGAP8B1AHC4 643 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 PMLP29590 882 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 CCNA1P78396 465 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 ARHGAP8P85298 464 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 PTPN21Q16825 1174 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 WDR78Q5VTH9 848 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 BANK1Q8NDB2 785 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 KLHDC9Q8NEP7 349 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 GLT1D1Q96MS3 346 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 MPHOSPH8Q99549 860 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 NOC4LQ9BVI4 516 aaKnown RBP9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 CTNNA3Q9UI47 895 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 PCDHB13Q9Y5F0 798 aa9.68□□□□□ -0.86
EXOSC3-206ENST00000489414 ATG2AQ2TAZ0 1938 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 KCNA10Q16322 511 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 HHIPL2Q6UWX4 724 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 KDF1Q8NAX2 398 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 LENG1Q96BZ8 264 aaPredicted RBP9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 SCLYQ96I15 445 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 NRBP1Q9UHY1 535 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 RABGAP1Q9Y3P9 1069 aa9.67□□□□□ -0.86
EXOSC3-206ENST00000489414 SYNRGQ9UMZ2 1314 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 NCK2O43639 380 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 PTPROQ16827 1216 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 CDC42EP5Q6NZY7 148 aa9.66□□□□□ -0.86
EXOSC3-206ENST00000489414 DPP9Q86TI2 863 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms