RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 SRLQ86TD4 932 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 ENAHQ8N8S7 591 aaPredicted RBP12.39□□□□□ -0.43
NEB-215ENST00000489048 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 ITGB4P16144 1822 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 RNF225M0QZC1 329 aaPredicted RBP12.39□□□□□ -0.43
NEB-215ENST00000489048 DDAH1O94760 285 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 ABL1P00519 1130 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 CCT6AP40227 531 aaKnown RBP12.39□□□□□ -0.43
NEB-215ENST00000489048 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
NEB-215ENST00000489048 HELBQ8NG08 1087 aaPredicted RBP12.39□□□□□ -0.43
NEB-215ENST00000489048 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
NEB-215ENST00000489048 RMND1Q9NWS8 449 aa12.39□□□□□ -0.43
NEB-215ENST00000489048 A0A1W2PQC6 194 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 LEKR1Q6ZMV7 388 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 MTRQ99707 1265 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 REXO2Q9Y3B8 237 aaKnown RBP12.38□□□□□ -0.43
NEB-215ENST00000489048 CNTNAP5Q8WYK1 1306 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 MYO1CO00159 1063 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 PTGDRQ13258 359 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 SEMA3FQ13275 785 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 CATIPQ7Z7H3 387 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 NOA1Q8NC60 698 aaKnown RBP12.38□□□□□ -0.43
NEB-215ENST00000489048 NUP88Q99567 741 aaPredicted RBP12.38□□□□□ -0.43
NEB-215ENST00000489048 DNAJC7Q99615 494 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 HAUS4Q9H6D7 363 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
NEB-215ENST00000489048 H7C1D1 291 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 N4BP1O75113 896 aaKnown RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 NDUFA10O95299 355 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 MCM3P25205 808 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 KRT9P35527 623 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 TROAPQ12815 778 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 ZNF174Q15697 407 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 SUGCTQ9HAC7 445 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 MYH8P13535 1937 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 MYH13Q9UKX3 1938 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 BCL9O00512 1426 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 TARSL2A2RTX5 802 aaKnown RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 PRDM1O75626 825 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 USP14P54578 494 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 PAPD7Q5XG87 772 aaKnown RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 ARL6IP4Q66PJ3 421 aaKnown RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 RPGRIP1Q96KN7 1286 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 SLC4A9Q96Q91 983 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 VPS16Q9H269 839 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 TAB2Q9NYJ8 693 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
NEB-215ENST00000489048 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
NEB-215ENST00000489048 LAMB2P55268 1798 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 LRRIQ3A6PVS8 624 aaPredicted RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 TFRCP02786 760 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 CDC25AP30304 524 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 IFIT1BQ5T764 474 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 SOS2Q07890 1332 aaPredicted RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 LGALS16A8MUM7 142 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 BCAMP50895 628 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 IL17AQ16552 155 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 HSP90B2PQ58FF3 399 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 BRINP3Q76B58 766 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 OR8K1Q8NGG5 319 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 ZNF507Q8TCN5 953 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 TRERF1Q96PN7 1200 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 RIOK1Q9BRS2 568 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 BLZF1Q9H2G9 400 aa12.36□□□□□ -0.43
NEB-215ENST00000489048 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
NEB-215ENST00000489048 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
NEB-215ENST00000489048 CYP7A1P22680 504 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 EEF1GP26641 437 aaKnown RBP12.35□□□□□ -0.43
NEB-215ENST00000489048 MEA1Q16626 185 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
NEB-215ENST00000489048 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
NEB-215ENST00000489048 ADGRA1Q86SQ6 560 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
NEB-215ENST00000489048 IRF2BP1Q8IU81 584 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 ADSSL1Q8N142 457 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 MB21D1Q8N884 522 aa12.35□□□□□ -0.43
NEB-215ENST00000489048 CHP1Q99653 195 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms