RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TLR6Q9Y2C9 796 aa5.54□□□□□ -1.52
CCDC93-209ENST00000488908 ABLIM1O14639 778 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 EFEMP2O95967 443 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 KRTAP10-2P60368 255 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 NMIQ13287 307 aaPredicted RBP5.53□□□□□ -1.52
CCDC93-209ENST00000488908 CEP128Q6ZU80 1094 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 GGNQ86UU5 652 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
CCDC93-209ENST00000488908 MAP6Q96JE9 813 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 CNTD2Q9H8S5 307 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 KLHL3Q9UH77 587 aa5.53□□□□□ -1.52
CCDC93-209ENST00000488908 SSU72P8A0A1W2PR75 194 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 IRS4O14654 1257 aaPredicted RBP5.52□□□□□ -1.53
CCDC93-209ENST00000488908 CILPO75339 1184 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 PNLIPP16233 465 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 PCBP3P57721 371 aaKnown RBP5.52□□□□□ -1.53
CCDC93-209ENST00000488908 YBX1P67809 324 aaKnown RBP5.52□□□□□ -1.53
CCDC93-209ENST00000488908 NFKB2Q00653 900 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 MEI1Q5TIA1 1274 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 CNKSR3Q6P9H4 555 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 PHACTR4Q8IZ21 702 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 ZDHHC14Q8IZN3 488 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 USHBP1Q8N6Y0 703 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 PHC3Q8NDX5 983 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 MZB1Q8WU39 189 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 NOC4LQ9BVI4 516 aaKnown RBP5.52□□□□□ -1.53
CCDC93-209ENST00000488908 HDAC8Q9BY41 377 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 EPB41L4AQ9HCS5 686 aaPredicted RBP5.52□□□□□ -1.53
CCDC93-209ENST00000488908 REV1Q9UBZ9 1251 aa5.52□□□□□ -1.53
CCDC93-209ENST00000488908 PRR36Q9H6K5 1346 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 CHURC1-FNTBB4DL54 471 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 VMACQ2NL98 169 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 BNC2Q6ZN30 1099 aaPredicted RBP5.51□□□□□ -1.53
CCDC93-209ENST00000488908 DAGLBQ8NCG7 672 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 TEPSINQ96N21 525 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 FOXP3Q9BZS1 431 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 LUC7LQ9NQ29 371 aaKnown RBP5.51□□□□□ -1.53
CCDC93-209ENST00000488908 TCFL5Q9UL49 500 aa5.51□□□□□ -1.53
CCDC93-209ENST00000488908 ZC3H12DA2A288 527 aaKnown RBP5.5□□□□□ -1.53
CCDC93-209ENST00000488908 FAM221AA4D161 298 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 SDHBP21912 280 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 GBP1P32455 592 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 ARL4AP40617 200 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 ST13P50502 369 aaKnown RBP5.5□□□□□ -1.53
CCDC93-209ENST00000488908 CDR1P51861 262 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 RTP1P59025 263 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 ERVFRD-1P60508 538 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 RNF4P78317 190 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 TMEM62Q0P6H9 643 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 FAM129CQ86XR2 697 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 ZNF655Q8N720 491 aaPredicted RBP5.5□□□□□ -1.53
CCDC93-209ENST00000488908 GATAD2BQ8WXI9 593 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 VWCEQ96DN2 955 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 TCTN2Q96GX1 697 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 HHIPL1Q96JK4 782 aa5.5□□□□□ -1.53
CCDC93-209ENST00000488908 DUSP9Q99956 384 aaKnown RBP5.5□□□□□ -1.53
CCDC93-209ENST00000488908 TMEM82A0PJX8 343 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 HTR3BO95264 441 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 MPOP05164 745 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 LMNB2Q03252 620 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 CAMK2GQ13555 558 aaPredicted RBP5.49□□□□□ -1.53
CCDC93-209ENST00000488908 TAF1CQ15572 869 aaPredicted RBP5.49□□□□□ -1.53
CCDC93-209ENST00000488908 FRMD5Q7Z6J6 570 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 TMEFF1Q8IYR6 380 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 LINC00116Q8NCU8 138 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 KIF2CQ99661 725 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 ADAM7Q9H2U9 754 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 IVNS1ABPQ9Y6Y0 642 aa5.49□□□□□ -1.53
CCDC93-209ENST00000488908 F13A1P00488 732 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 SPATS1Q496A3 300 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 GALNT18Q6P9A2 607 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 TMC6Q7Z403 805 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 PWWP2AQ96N64 755 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 PLCD4Q9BRC7 762 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 TNFRSF10DQ9UBN6 386 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 TAF6LQ9Y6J9 622 aa5.48□□□□□ -1.53
CCDC93-209ENST00000488908 WTIPA6NIX2 430 aaPredicted RBP5.47□□□□□ -1.53
CCDC93-209ENST00000488908 RGS13O14921 159 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 GRIN3BO60391 1043 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 FKTNO75072 461 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 SYPP08247 313 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 PLP2Q04941 152 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 EFEMP1Q12805 493 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 LAPTM5Q13571 262 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 MLECQ14165 292 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 ZXDCQ2QGD7 858 aaPredicted RBP5.47□□□□□ -1.53
CCDC93-209ENST00000488908 LDHDQ86WU2 507 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 IGDCC3Q8IVU1 814 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 FCRL2Q96LA5 508 aaPredicted RBP5.47□□□□□ -1.53
CCDC93-209ENST00000488908 TMPRSS5Q9H3S3 457 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 KLHL14Q9P2G3 628 aa5.47□□□□□ -1.53
CCDC93-209ENST00000488908 DNAJA2O60884 412 aa5.46□□□□□ -1.54
CCDC93-209ENST00000488908 PF4P02776 101 aa5.46□□□□□ -1.54
CCDC93-209ENST00000488908 ENDOUP21128 410 aaKnown RBP5.46□□□□□ -1.54
CCDC93-209ENST00000488908 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.54
CCDC93-209ENST00000488908 BBS9Q3SYG4 887 aa5.46□□□□□ -1.54
CCDC93-209ENST00000488908 TMC3Q7Z5M5 1100 aa5.46□□□□□ -1.54
CCDC93-209ENST00000488908 BDH2Q9BUT1 245 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms