RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 VWA5AO00534 786 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 ZNF213O14771 459 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 RAD21O60216 631 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 XRCC5P13010 732 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 EN2P19622 333 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 MLLT1Q03111 559 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 TMEM132BQ14DG7 1078 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 REPS2Q8NFH8 660 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 TMEM106CQ9BVX2 250 aa18.88■□□□□ 0.61
CTDSP1-209ENST00000488627 CYP2B6P20813 491 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 PTPREP23469 700 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 KIAA0100Q14667 2235 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 RRP12Q5JTH9 1297 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 SLFN13Q68D06 897 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 MFSD6Q6ZSS7 791 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 SHCBP1Q8NEM2 672 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 RAD50Q92878 1312 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 BIN2Q9UBW5 565 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 STX8Q9UNK0 236 aa18.87■□□□□ 0.61
CTDSP1-209ENST00000488627 DOCK3Q8IZD9 2030 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 RLFQ13129 1914 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 SGSM2O43147 1006 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 INHAP05111 366 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 CCL5P13501 91 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 ERCC3P19447 782 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 UBXN2AP68543 259 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 RUFY2Q8WXA3 655 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 SLF1Q9BQI6 1058 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
CTDSP1-209ENST00000488627 NEDD4P46934 1319 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 SLC15A5A6NIM6 579 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 PTH1RQ03431 593 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 TRIM32Q13049 653 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 MAP2K5Q13163 448 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 GRB14Q14449 540 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 RCSD1Q6JBY9 416 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 PRPF38AQ8NAV1 312 aaKnown RBP18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 TRIB2Q92519 343 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 GMCL1Q96IK5 515 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 UNC93B1Q9H1C4 597 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 CTNNA3Q9UI47 895 aa18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 ZNF214Q9UL59 606 aaPredicted RBP18.85■□□□□ 0.61
CTDSP1-209ENST00000488627 MYH8P13535 1937 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 MGAMO43451 1857 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 HMGCRP04035 888 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 GJB1P08034 283 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 BMP3P12645 472 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 MCCP23508 829 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 RGS2P41220 211 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 WDR78Q5VTH9 848 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 RNF208Q9H0X6 261 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 FEM1BQ9UK73 627 aa18.84■□□□□ 0.61
CTDSP1-209ENST00000488627 STRNO43815 780 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 IGHA2P01877 340 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 HOXC6P09630 235 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 STAT3P40763 770 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 PLS1Q14651 629 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 CCL14Q16627 93 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 IMMTQ16891 758 aaKnown RBP18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 BMP2KLQ5H9B9 411 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 MAP3K21Q5TCX8 1036 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 RASGRP2Q7LDG7 609 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 RIOX2Q8IUF8 465 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 CCDC136Q96JN2 1154 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 TTC14Q96N46 770 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 TMEM47Q9BQJ4 181 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 MROH8Q9H579 483 aa18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 MKI67P46013 3256 aaKnown RBP18.83■□□□□ 0.6
CTDSP1-209ENST00000488627 PLA2G6O60733 806 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 TOP1P11387 765 aaKnown RBP18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 SLC1A4P43007 532 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 GJA8P48165 433 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 NT5C2P49902 561 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 NPLOC4Q8TAT6 608 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 ESR2Q92731 530 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 APBA2Q99767 749 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 PAK6Q9NQU5 681 aaPredicted RBP18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 IVNS1ABPQ9Y6Y0 642 aa18.82■□□□□ 0.6
CTDSP1-209ENST00000488627 TMEM232C9JQI7 657 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 ATP2A1O14983 1001 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 COBLO75128 1261 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 KDM4AO75164 1064 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 SLC25A27O95847 323 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 ADORA2AP29274 412 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 NCAPG2Q86XI2 1143 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 ABRAQ8N0Z2 381 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 KIFC2Q96AC6 838 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 SLC38A10Q9HBR0 1119 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 CWC22Q9HCG8 908 aaKnown RBP18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 FLRT1Q9NZU1 646 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
CTDSP1-209ENST00000488627 PLXNB2O15031 1838 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms