RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 KDM4AO75164 1064 aa17.74■□□□□ 0.43
CXCL12-207ENST00000488591 TOP1P11387 765 aaKnown RBP17.74■□□□□ 0.43
CXCL12-207ENST00000488591 MAPK4P31152 587 aa17.74■□□□□ 0.43
CXCL12-207ENST00000488591 RAET1EQ8TD07 263 aa17.74■□□□□ 0.43
CXCL12-207ENST00000488591 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
CXCL12-207ENST00000488591 RBM8AQ9Y5S9 174 aaKnown RBP17.74■□□□□ 0.43
CXCL12-207ENST00000488591 CYP21A2P08686 494 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 SLC1A4P43007 532 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 NOVP48745 357 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 Q3C1V9 767 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 NUP88Q99567 741 aaPredicted RBP17.73■□□□□ 0.43
CXCL12-207ENST00000488591 LSG1Q9H089 658 aaKnown RBP17.73■□□□□ 0.43
CXCL12-207ENST00000488591 FEM1BQ9UK73 627 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 PPP1R9AQ9ULJ8 1098 aa17.73■□□□□ 0.43
CXCL12-207ENST00000488591 ZSWIM8A7E2V4 1837 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 CCDC85CA6NKD9 419 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 BMP3P12645 472 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
CXCL12-207ENST00000488591 NBPF11Q86T75 865 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
CXCL12-207ENST00000488591 ATG4CQ96DT6 458 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 SLF1Q9BQI6 1058 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 TMEM47Q9BQJ4 181 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 UBAC1Q9BSL1 405 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 BTBD7Q9P203 1132 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 ZSWIM5Q9P217 1185 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 CTDP1Q9Y5B0 961 aaPredicted RBP17.72■□□□□ 0.43
CXCL12-207ENST00000488591 PTCH2Q9Y6C5 1203 aa17.72■□□□□ 0.43
CXCL12-207ENST00000488591 PEX10O60683 326 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 CNMDO75829 334 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 MCCP23508 829 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 PRKCZQ05513 592 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 PLS1Q14651 629 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 SLC9C1Q4G0N8 1177 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 IFFO2Q5TF58 517 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 NCOA7Q8NI08 942 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 CHURC1Q8WUH1 139 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 ZKSCAN3Q9BRR0 538 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 FBXO28Q9NVF7 368 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 ADAMTS5Q9UNA0 930 aa17.71■□□□□ 0.43
CXCL12-207ENST00000488591 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 E7EWF7 191 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 VWA5AO00534 786 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 CAPN15O75808 1086 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 FLT3LGP49771 235 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-207ENST00000488591 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 PLEKHH3Q7Z736 793 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 ZSCAN10Q96SZ4 725 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-207ENST00000488591 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 MTMR7Q9Y216 660 aa17.7■□□□□ 0.42
CXCL12-207ENST00000488591 RLFQ13129 1914 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 ZBED4O75132 1171 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 FDX1P10109 184 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 STAT2P52630 851 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 NUDT12Q9BQG2 462 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 SPATC1LQ9H0A9 340 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 PORCNQ9H237 461 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 KAT14Q9H8E8 782 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 IVNS1ABPQ9Y6Y0 642 aa17.69■□□□□ 0.42
CXCL12-207ENST00000488591 ERICH2A1L162 156 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 SLC25A27O95847 323 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 GRK4P32298 578 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 IRF5Q13568 498 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 TMEM132BQ14DG7 1078 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 SART3Q15020 963 aaKnown RBP17.68■□□□□ 0.42
CXCL12-207ENST00000488591 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 MOV10L1Q9BXT6 1211 aaKnown RBP17.68■□□□□ 0.42
CXCL12-207ENST00000488591 TNKSO95271 1327 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
CXCL12-207ENST00000488591 SLC27A2O14975 620 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 ADCY3O60266 1144 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 PLA2G6O60733 806 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 COPB2P35606 906 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 STAT3P40763 770 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 NECTIN1Q15223 517 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 KCTD1Q719H9 257 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 NCAPG2Q86XI2 1143 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 ENAHQ8N8S7 591 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-207ENST00000488591 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 NKX2-3Q8TAU0 364 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 ARMC5Q96C12 935 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 MROH8Q9H579 483 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 BIN2Q9UBW5 565 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-207ENST00000488591 GJD2Q9UKL4 321 aa17.67■□□□□ 0.42
CXCL12-207ENST00000488591 A0A0G2JMZ2 1700 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms