RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 IVNS1ABPQ9Y6Y0 642 aa21.1■□□□□ 0.97
ITGB1-215ENST00000488494 SLC15A5A6NIM6 579 aa21.09■□□□□ 0.97
ITGB1-215ENST00000488494 NDUFB10O96000 172 aa21.09■□□□□ 0.97
ITGB1-215ENST00000488494 PRKAR2AP13861 404 aaKnown RBP21.09■□□□□ 0.97
ITGB1-215ENST00000488494 MAP2K5Q13163 448 aa21.09■□□□□ 0.97
ITGB1-215ENST00000488494 CCL14Q16627 93 aa21.09■□□□□ 0.97
ITGB1-215ENST00000488494 LRRC47Q8N1G4 583 aaKnown RBP21.09■□□□□ 0.97
ITGB1-215ENST00000488494 MTMR4Q9NYA4 1195 aa21.09■□□□□ 0.97
ITGB1-215ENST00000488494 SDSP20132 328 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 PTPREP23469 700 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 TFAP4Q01664 338 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 GRB14Q14449 540 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 TRMT44Q8IYL2 757 aaKnown RBP21.08■□□□□ 0.97
ITGB1-215ENST00000488494 NEDD1Q8NHV4 660 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 DIAPH3Q9NSV4 1193 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 PPP1R9AQ9ULJ8 1098 aa21.08■□□□□ 0.97
ITGB1-215ENST00000488494 COL11A1P12107 1806 aaPredicted RBP21.08■□□□□ 0.96
ITGB1-215ENST00000488494 F5H6K3 240 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 FARP2O94887 1054 aaPredicted RBP21.07■□□□□ 0.96
ITGB1-215ENST00000488494 SGPL1O95470 568 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 TTLL1O95922 423 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 ERCC3P19447 782 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 KLRC3Q07444 240 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 ALX1Q15699 326 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 SHCBP1Q8NEM2 672 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 INCENPQ9NQS7 918 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
ITGB1-215ENST00000488494 ZMYM6O95789 1325 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 TSPY2A6NKD2 308 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 HSPD1P10809 573 aaKnown RBP21.06■□□□□ 0.96
ITGB1-215ENST00000488494 PDE4AP27815 886 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 TMEM132BQ14DG7 1078 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 MAP3K21Q5TCX8 1036 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 HMX1Q9NP08 348 aaPredicted RBP21.06■□□□□ 0.96
ITGB1-215ENST00000488494 SYNPO2Q9UMS6 1093 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 TACC3Q9Y6A5 838 aa21.06■□□□□ 0.96
ITGB1-215ENST00000488494 RPTORQ8N122 1335 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 VWA5AO00534 786 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 FGAP02671 866 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 UBE2Q1Q7Z7E8 422 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 GMCL1P1Q8NEA9 526 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 SLF1Q9BQI6 1058 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 FLRT1Q9NZU1 646 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 ADAMTS5Q9UNA0 930 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 LAMA4Q16363 1823 aa21.05■□□□□ 0.96
ITGB1-215ENST00000488494 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
ITGB1-215ENST00000488494 TFRCP02786 760 aaKnown RBP21.04■□□□□ 0.96
ITGB1-215ENST00000488494 ADORA2AP29274 412 aa21.04■□□□□ 0.96
ITGB1-215ENST00000488494 MFAP1P55081 439 aaKnown RBP21.04■□□□□ 0.96
ITGB1-215ENST00000488494 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
ITGB1-215ENST00000488494 MKL1Q969V6 931 aa21.04■□□□□ 0.96
ITGB1-215ENST00000488494 CRISPLD2Q9H0B8 497 aa21.04■□□□□ 0.96
ITGB1-215ENST00000488494 MROH8Q9H579 483 aa21.04■□□□□ 0.96
ITGB1-215ENST00000488494 ORC4O43929 436 aa21.03■□□□□ 0.96
ITGB1-215ENST00000488494 NMT2O60551 498 aa21.03■□□□□ 0.96
ITGB1-215ENST00000488494 HOXC6P09630 235 aa21.03■□□□□ 0.96
ITGB1-215ENST00000488494 HAND2P61296 217 aa21.03■□□□□ 0.96
ITGB1-215ENST00000488494 CACNB2Q08289 660 aaPredicted RBP21.03■□□□□ 0.96
ITGB1-215ENST00000488494 NPLOC4Q8TAT6 608 aa21.03■□□□□ 0.96
ITGB1-215ENST00000488494 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
ITGB1-215ENST00000488494 ZNF214Q9UL59 606 aaPredicted RBP21.03■□□□□ 0.96
ITGB1-215ENST00000488494 ISY1Q9ULR0 285 aaKnown RBP21.03■□□□□ 0.96
ITGB1-215ENST00000488494 HIP1O00291 1037 aa21.02■□□□□ 0.96
ITGB1-215ENST00000488494 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.96
ITGB1-215ENST00000488494 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.96
ITGB1-215ENST00000488494 TTC22Q5TAA0 569 aa21.02■□□□□ 0.96
ITGB1-215ENST00000488494 SLFN13Q68D06 897 aa21.02■□□□□ 0.96
ITGB1-215ENST00000488494 REPS2Q8NFH8 660 aa21.02■□□□□ 0.96
ITGB1-215ENST00000488494 NBPF3Q9H094 633 aa21.02■□□□□ 0.96
ITGB1-215ENST00000488494 STX8Q9UNK0 236 aa21.02■□□□□ 0.96
ITGB1-215ENST00000488494 STRNO43815 780 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 SLC25A27O95847 323 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 CCND3P30281 292 aaPredicted RBP21.01■□□□□ 0.95
ITGB1-215ENST00000488494 PPP4R3BQ5MIZ7 849 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 MFSD14CQ5VZR4 134 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 DPP9Q86TI2 863 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 RIOX2Q8IUF8 465 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 TBC1D10CQ8IV04 446 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 IL17RBQ9NRM6 502 aa21.01■□□□□ 0.95
ITGB1-215ENST00000488494 FGRP09769 529 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 FCER1AP12319 257 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 ABRAQ8N0Z2 381 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 DIS3LQ8TF46 1054 aaKnown RBP21■□□□□ 0.95
ITGB1-215ENST00000488494 KIFC2Q96AC6 838 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 CHMP4CQ96CF2 233 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 TEX13BQ9BXU2 312 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 FEM1BQ9UK73 627 aa21■□□□□ 0.95
ITGB1-215ENST00000488494 FRMPD3Q5JV73 1810 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 COBLO75128 1261 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 BMP3P12645 472 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 CYP2C19P33261 490 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 STAT3P40763 770 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 SNRNP48Q6IEG0 339 aaKnown RBP20.99■□□□□ 0.95
ITGB1-215ENST00000488494 RASGRP2Q7LDG7 609 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
ITGB1-215ENST00000488494 GMCL1Q96IK5 515 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 MMP19Q99542 508 aa20.99■□□□□ 0.95
ITGB1-215ENST00000488494 CAPN2P17655 700 aa20.98■□□□□ 0.95
ITGB1-215ENST00000488494 COPB2P35606 906 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms