RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 DNM1Q05193 864 aaKnown RBP14.74□□□□□ -0.05
NELFE-209ENST00000488426 CRACR2BQ8N4Y2 399 aaPredicted RBP14.74□□□□□ -0.05
NELFE-209ENST00000488426 PHKBQ93100 1093 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 ALG1Q9BT22 464 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 ENTPD3O75355 529 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 MBD3O95983 291 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 IREB2P48200 963 aaKnown RBP14.74□□□□□ -0.05
NELFE-209ENST00000488426 TNNI2P48788 182 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 ATL3Q6DD88 541 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 NBPF11Q86T75 865 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 FAM83AQ86UY5 434 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 ANKRD13AQ8IZ07 590 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 CTCFLQ8NI51 663 aaPredicted RBP14.74□□□□□ -0.05
NELFE-209ENST00000488426 ZKSCAN4Q969J2 545 aaPredicted RBP14.74□□□□□ -0.05
NELFE-209ENST00000488426 PTPN18Q99952 460 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 SLC26A6Q9BXS9 759 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 RNF26Q9BY78 433 aaPredicted RBP14.74□□□□□ -0.05
NELFE-209ENST00000488426 SAGE1Q9NXZ1 904 aa14.74□□□□□ -0.05
NELFE-209ENST00000488426 OTOFQ9HC10 1997 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 ATRNL1Q5VV63 1379 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 IGF2BP3O00425 579 aaKnown RBP eCLIP14.73□□□□□ -0.05
NELFE-209ENST00000488426 DEXIO95424 95 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 NCLP19338 710 aaKnown RBP14.73□□□□□ -0.05
NELFE-209ENST00000488426 KIF5BP33176 963 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 NOVP48745 357 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 FOSBP53539 338 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 VGLL4Q14135 290 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 FKBP1CQ5VVH2 108 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.73□□□□□ -0.058e-8■□□□□ 9.6
NELFE-209ENST00000488426 ABHD8Q96I13 439 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 TMOD2Q9NZR1 351 aa14.73□□□□□ -0.05
NELFE-209ENST00000488426 GREB1LQ9C091 1923 aaPredicted RBP14.73□□□□□ -0.05
NELFE-209ENST00000488426 MAP3K9P80192 1104 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 TRIM29Q14134 588 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 TMTC3Q6ZXV5 915 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 SH3BP5LQ7L8J4 393 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 PNMA1Q8ND90 353 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 MCOLN1Q9GZU1 580 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 SCAND2PQ9GZW5 306 aaPredicted RBP14.72□□□□□ -0.05
NELFE-209ENST00000488426 PI4KBQ9UBF8 816 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 HTTP42858 3142 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 ELP1O95163 1332 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 FIBPO43427 364 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 GUCY1B3Q02153 619 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 FUT2Q10981 343 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 GSE1Q14687 1217 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 BRAPQ7Z569 592 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 OPTNQ96CV9 577 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 CCDC17Q96LX7 622 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
NELFE-209ENST00000488426 INPP5BP32019 993 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 SHMT1P34896 483 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 GNAQP50148 359 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 AKAP17AQ02040 695 aaKnown RBP14.71□□□□□ -0.05
NELFE-209ENST00000488426 PPP4R3BQ5MIZ7 849 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 IFNL1Q8IU54 200 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
NELFE-209ENST00000488426 MS4A4AQ96JQ5 239 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 CFAP45Q9UL16 551 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 STX8Q9UNK0 236 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 SNCAIPQ9Y6H5 919 aa14.71□□□□□ -0.05
NELFE-209ENST00000488426 PRPF3O43395 683 aaKnown RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 ZBTB48P10074 688 aaPredicted RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 TOP1P11387 765 aaKnown RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 UBE2HP62256 183 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 DGKZQ13574 1117 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 GRM4Q14833 912 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 KRT40Q6A162 431 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 FAM173BQ6P4H8 233 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 METTL16Q86W50 562 aaKnown RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 FOXP4Q8IVH2 680 aaPredicted RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 ZNF296Q8WUU4 475 aaPredicted RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 ZNF396Q96N95 335 aaPredicted RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 TMEM47Q9BQJ4 181 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
NELFE-209ENST00000488426 BRCA2P51587 3418 aa14.7□□□□□ -0.06
NELFE-209ENST00000488426 IGKV6D-41A0A0C4DH26 115 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 DDTLA6NHG4 134 aaPredicted RBP14.69□□□□□ -0.06
NELFE-209ENST00000488426 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 AIFM3Q96NN9 605 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 WRNIP1Q96S55 665 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.69□□□□□ -0.06
NELFE-209ENST00000488426 CNTNAP5Q8WYK1 1306 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 MANSC4A6NHS7 340 aaPredicted RBP14.69□□□□□ -0.06
NELFE-209ENST00000488426 PLEKHA8P1O95397 391 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 AKR1B1P15121 316 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 OTUD7BQ6GQQ9 843 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 ZSCAN29Q8IWY8 852 aaPredicted RBP14.69□□□□□ -0.06
NELFE-209ENST00000488426 OTUD5Q96G74 571 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 MTMR4Q9NYA4 1195 aa14.69□□□□□ -0.06
NELFE-209ENST00000488426 UNCXA6NJT0 531 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 GPR25O00155 361 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 XBP1P17861 261 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 CAP1Q01518 475 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 CMTR1Q8N1G2 835 aaKnown RBP14.68□□□□□ -0.06
NELFE-209ENST00000488426 CCDC82Q8N4S0 544 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms