RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 BMP3P12645 472 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
HDLBP-242ENST00000488013 IFNAR1P17181 557 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 ZNF543Q08ER8 600 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 SCRN1Q12765 414 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 STK3Q13188 491 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 SMC3Q9UQE7 1217 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 MYH1P12882 1939 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 BAZ2AQ9UIF9 1905 aaKnown RBP12.83□□□□□ -0.36
HDLBP-242ENST00000488013 A0A1W2PRG0 241 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 TMEM88BA6NKF7 163 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 KLRF2D3W0D1 207 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 RAD21O60216 631 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
HDLBP-242ENST00000488013 PABPC4Q13310 644 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDLBP-242ENST00000488013 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 MTMR2Q13614 643 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 CST9Q5W186 159 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 DLK2Q6UY11 383 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 TMTC3Q6ZXV5 915 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-242ENST00000488013 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
HDLBP-242ENST00000488013 SPZ1Q9BXG8 430 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 RNF26Q9BY78 433 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-242ENST00000488013 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 KCNH4Q9UQ05 1017 aa12.82□□□□□ -0.36
HDLBP-242ENST00000488013 TRIM75PA6NK02 468 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 XBP1P17861 261 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 ECE1P42892 770 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 GTF2A2P52657 109 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 HUNKP57058 714 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
HDLBP-242ENST00000488013 SHROOM1Q2M3G4 852 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-242ENST00000488013 CLEC10AQ8IUN9 316 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 TEX2Q8IWB9 1127 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 NECAB1Q8N987 351 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 FAM184AQ8NB25 1140 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 OPTNQ96CV9 577 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 MYL10Q9BUA6 226 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 MAD2L2Q9UI95 211 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 STK36Q9NRP7 1315 aa12.81□□□□□ -0.36
HDLBP-242ENST00000488013 A0A0G2JLL6 359 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 hCG_1984214I3L0E3 225 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 PRPF3O43395 683 aaKnown RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 DEXIO95424 95 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 CETPP11597 493 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 RXRAP19793 462 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 ADD1P35611 737 aaKnown RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 STAT2P52630 851 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 BTNL9Q6UXG8 535 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 PRRT2Q7Z6L0 340 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 ZNF713Q8N859 430 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 FAM217BQ9NTX9 383 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 HOXC10Q9NYD6 342 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 ISY1Q9ULR0 285 aaKnown RBP12.8□□□□□ -0.36
HDLBP-242ENST00000488013 FZD1Q9UP38 647 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
HDLBP-242ENST00000488013 PTPDC1A2A3K4 754 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 IRF6O14896 467 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 LARGE1O95461 756 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 VCAM1P19320 739 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 CDC27P30260 824 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 INHBEP58166 350 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 IKQ13123 557 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 NTRK3Q16288 839 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 RGMBQ6NW40 437 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 PRPF38AQ8NAV1 312 aaKnown RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 CCDC12Q8WUD4 166 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-242ENST00000488013 WNK4Q96J92 1243 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
HDLBP-242ENST00000488013 RIOX1Q9H6W3 641 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms