RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RAD21O60216 631 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 MSCO60682 206 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 FAM83BQ5T0W9 1011 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 EPB41L4AQ9HCS5 686 aaPredicted RBP14.61□□□□□ -0.07
VPS16-208ENST00000487461 GOPCQ9HD26 462 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 SLC5A4Q9NY91 659 aa14.61□□□□□ -0.07
VPS16-208ENST00000487461 VWA5AO00534 786 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 SLC25A27O95847 323 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 ZFYP08048 801 aaPredicted RBP14.6□□□□□ -0.07
VPS16-208ENST00000487461 FCER1AP12319 257 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 STAT3P40763 770 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 ANO1Q5XXA6 986 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 RIOX2Q8IUF8 465 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
VPS16-208ENST00000487461 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
VPS16-208ENST00000487461 NYAP2Q9P242 653 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 PPP1R9AQ9ULJ8 1098 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 MYH7P12883 1935 aa14.6□□□□□ -0.07
VPS16-208ENST00000487461 PATL2C9JE40 543 aaKnown RBP14.59□□□□□ -0.07
VPS16-208ENST00000487461 DNM1LO00429 736 aa14.59□□□□□ -0.07
VPS16-208ENST00000487461 GNAT2P19087 354 aa14.59□□□□□ -0.07
VPS16-208ENST00000487461 ATN1P54259 1190 aaPredicted RBP14.59□□□□□ -0.07
VPS16-208ENST00000487461 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
VPS16-208ENST00000487461 REPS2Q8NFH8 660 aa14.59□□□□□ -0.07
VPS16-208ENST00000487461 PI4K2BQ8TCG2 481 aa14.59□□□□□ -0.07
VPS16-208ENST00000487461 MAML3Q96JK9 1138 aa14.59□□□□□ -0.07
VPS16-208ENST00000487461 SEC62Q99442 399 aaKnown RBP14.59□□□□□ -0.07
VPS16-208ENST00000487461 MMP19Q99542 508 aa14.59□□□□□ -0.07
VPS16-208ENST00000487461 ZNF214Q9UL59 606 aaPredicted RBP14.59□□□□□ -0.07
VPS16-208ENST00000487461 MYH8P13535 1937 aa14.58□□□□□ -0.07
VPS16-208ENST00000487461 IGKV6D-41A0A0C4DH26 115 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 F5H6K3 240 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 SEPT4O43236 478 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 APPP05067 770 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 PGK2P07205 417 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 TDO2P48775 406 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 KLRC3Q07444 240 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 IFNL3Q8IZI9 196 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 ZNF444Q8N0Y2 327 aaPredicted RBP14.58□□□□□ -0.08
VPS16-208ENST00000487461 ARRDC4Q8NCT1 418 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 UBE2OQ9C0C9 1292 aaKnown RBP14.58□□□□□ -0.08
VPS16-208ENST00000487461 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 ROBO3Q96MS0 1386 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 A0A0G2JMZ2 1700 aa14.58□□□□□ -0.08
VPS16-208ENST00000487461 ERC2O15083 957 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 PRDM1O75626 825 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 NDUFB10O96000 172 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 MDM2Q00987 491 aaPredicted RBP14.57□□□□□ -0.08
VPS16-208ENST00000487461 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 TDHQ8IZJ6 230 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 MKL1Q969V6 931 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
VPS16-208ENST00000487461 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
VPS16-208ENST00000487461 KCTD2Q14681 263 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
VPS16-208ENST00000487461 LRIT3Q3SXY7 679 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 ZMYM1Q5SVZ6 1142 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 SLC39A5Q6ZMH5 540 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 CEP95Q96GE4 821 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 MTMR4Q9NYA4 1195 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 DIS3Q9Y2L1 958 aaKnown RBP14.56□□□□□ -0.08
VPS16-208ENST00000487461 RIPK3Q9Y572 518 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 ZNF236Q9UL36 1845 aa14.56□□□□□ -0.08
VPS16-208ENST00000487461 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
VPS16-208ENST00000487461 RTP1P59025 263 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 LRRC41Q15345 812 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 FAM47AQ5JRC9 791 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 PRPF38AQ8NAV1 312 aaKnown RBP14.55□□□□□ -0.08
VPS16-208ENST00000487461 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 ZNF287Q9HBT7 754 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 LAMA3Q16787 3333 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
VPS16-208ENST00000487461 ZNFX1Q9P2E3 1918 aaKnown RBP14.54□□□□□ -0.08
VPS16-208ENST00000487461 KBTBD13C9JR72 458 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 MX1P20591 662 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 COPB2P35606 906 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 ADCYAP1R1P41586 468 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 RRP1P56182 461 aaKnown RBP14.54□□□□□ -0.08
VPS16-208ENST00000487461 SNRNP48Q6IEG0 339 aaKnown RBP14.54□□□□□ -0.08
VPS16-208ENST00000487461 NEDD1Q8NHV4 660 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 TEX13BQ9BXU2 312 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 NRBP1Q9UHY1 535 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 ATP11BQ9Y2G3 1177 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 FRMPD3Q5JV73 1810 aa14.54□□□□□ -0.08
VPS16-208ENST00000487461 GREB1LQ9C091 1923 aaPredicted RBP14.54□□□□□ -0.08
VPS16-208ENST00000487461 COL11A1P12107 1806 aaPredicted RBP14.53□□□□□ -0.08
VPS16-208ENST00000487461 SALL3Q9BXA9 1300 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 ATP2A1O14983 1001 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 ZBED4O75132 1171 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 TTLL1O95922 423 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 ZNF865P0CJ78 1059 aaPredicted RBP14.53□□□□□ -0.08
VPS16-208ENST00000487461 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 TFAP4Q01664 338 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 PPARAQ07869 468 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 ANKRD45Q5TZF3 282 aa14.53□□□□□ -0.08
VPS16-208ENST00000487461 GPR153Q6NV75 609 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms