RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SPATC1LQ9H0A9 340 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 RNF41Q9H4P4 317 aaPredicted RBP12.17□□□□□ -0.46
RNF220-215ENST00000487332 ATP2A1O14983 1001 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 STRNO43815 780 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 PLA2G6O60733 806 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 FDX1P10109 184 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 CCL5P13501 91 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 PTPREP23469 700 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 GJA8P48165 433 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 CTDSPL2Q05D32 466 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 CWC27Q6UX04 472 aaKnown RBP12.16□□□□□ -0.46
RNF220-215ENST00000487332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNF220-215ENST00000487332 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
RNF220-215ENST00000487332 SPICE1Q8N0Z3 855 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 REPS2Q8NFH8 660 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 ATG4CQ96DT6 458 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
RNF220-215ENST00000487332 MROH8Q9H579 483 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 PAK6Q9NQU5 681 aaPredicted RBP12.16□□□□□ -0.46
RNF220-215ENST00000487332 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 IVNS1ABPQ9Y6Y0 642 aa12.16□□□□□ -0.46
RNF220-215ENST00000487332 VWA5AO00534 786 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
RNF220-215ENST00000487332 OAZ1P54368 228 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 MAP2K5Q13163 448 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 MTFR1Q15390 333 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 RIOX2Q8IUF8 465 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 TRIB2Q92519 343 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 SLF1Q9BQI6 1058 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 CTNNA3Q9UI47 895 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 FEM1BQ9UK73 627 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 ZNF214Q9UL59 606 aaPredicted RBP12.15□□□□□ -0.46
RNF220-215ENST00000487332 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
RNF220-215ENST00000487332 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 PEX10O60683 326 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 IGHA2P01877 340 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 ELNP15502 786 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
RNF220-215ENST00000487332 TMEM132BQ14DG7 1078 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 FAM47AQ5JRC9 791 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 FAM160B2Q86V87 743 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 LRRC47Q8N1G4 583 aaKnown RBP12.14□□□□□ -0.47
RNF220-215ENST00000487332 PRPF38AQ8NAV1 312 aaKnown RBP12.14□□□□□ -0.47
RNF220-215ENST00000487332 SHISA4Q96DD7 197 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 TTC14Q96N46 770 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
RNF220-215ENST00000487332 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
RNF220-215ENST00000487332 RPTORQ8N122 1335 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 ZNF213O14771 459 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 RANBP6O60518 1105 aaKnown RBP12.13□□□□□ -0.47
RNF220-215ENST00000487332 BMP3P12645 472 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 ERCC3P19447 782 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 EN2P19622 333 aaPredicted RBP12.13□□□□□ -0.47
RNF220-215ENST00000487332 CYP2B6P20813 491 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 CHMLP26374 656 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
RNF220-215ENST00000487332 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 OLFML2BQ68BL8 750 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 SLFN13Q68D06 897 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 UBE2Q1Q7Z7E8 422 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 ESR2Q92731 530 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 TEX13BQ9BXU2 312 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.47
RNF220-215ENST00000487332 RNF208Q9H0X6 261 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
RNF220-215ENST00000487332 STX8Q9UNK0 236 aa12.13□□□□□ -0.47
RNF220-215ENST00000487332 NEDD4P46934 1319 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 SGPL1O95470 568 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
RNF220-215ENST00000487332 STAT2P52630 851 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 U2AF1L4Q8WU68 220 aaKnown RBP12.12□□□□□ -0.47
RNF220-215ENST00000487332 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
RNF220-215ENST00000487332 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 IL25Q9H293 177 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
RNF220-215ENST00000487332 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
RNF220-215ENST00000487332 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
RNF220-215ENST00000487332 SGSM2O43147 1006 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 ADORA2AP29274 412 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 STAT3P40763 770 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 SLC1A4P43007 532 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 HAND2P61296 217 aa12.11□□□□□ -0.47
RNF220-215ENST00000487332 BMP2KLQ5H9B9 411 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms