RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 JAG1P78504 1218 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 MAP2K1Q02750 393 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 RASA3Q14644 834 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 SEPT2Q15019 361 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 PFKFB3Q16875 520 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 TBC1D10BQ4KMP7 808 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 CLEC10AQ8IUN9 316 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 SIAH1Q8IUQ4 282 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 FAM177A1Q8N128 213 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 LRRC47Q8N1G4 583 aaKnown RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 SHISA4Q96DD7 197 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 ZNF396Q96N95 335 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 SCAND2PQ9GZW5 306 aaPredicted RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 GDPD2Q9HCC8 539 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 CLIP2Q9UDT6 1046 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 HACL1Q9UJ83 578 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 MYH6P13533 1939 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 ASTN2O75129 1339 aaPredicted RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 USP17L5A8MUK1 530 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 KLRF2D3W0D1 207 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 SCG2P13521 617 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 EEF2P13639 858 aaKnown RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 XBP1P17861 261 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 ICA1Q05084 483 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 ZNF543Q08ER8 600 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 SHROOM1Q2M3G4 852 aaPredicted RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 MYSM1Q5VVJ2 828 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 USP17L2Q6R6M4 530 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 RASGRP2Q7LDG7 609 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 APOBEC3FQ8IUX4 373 aaKnown RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 GPT2Q8TD30 523 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 TRPM4Q8TD43 1214 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 LEO1Q8WVC0 666 aaPredicted RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 PHF20Q9BVI0 1012 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 FOXP1Q9H334 677 aaPredicted RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 RIOX1Q9H6W3 641 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 CABP5Q9NP86 173 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 SH3GLB2Q9NR46 395 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 RCOR1Q9UKL0 485 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 CFAP45Q9UL16 551 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 DDX49Q9Y6V7 483 aaKnown RBP9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 MYH4Q9Y623 1939 aa9.93□□□□□ -0.82
NUDCD3-209ENST00000487118 TCHHQ07283 1943 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 PITPNM2Q9BZ72 1349 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 ZC3H4Q9UPT8 1303 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GADD45BO75293 160 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GDF11O95390 407 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GH2P01242 217 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GOLGA8HP0CJ92 632 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 UBE2HP62256 183 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 FMR1Q06787 632 aaKnown RBP eCLIP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 SAFBQ15424 915 aaKnown RBP eCLIP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 NPY5RQ15761 445 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GPATCH4Q5T3I0 446 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 PAXIP1Q6ZW49 1069 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GMCL1P1Q8NEA9 526 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 DCAF4Q8WV16 495 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 USP28Q96RU2 1077 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 GINM1Q9NU53 330 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 RTEL1Q9NZ71 1219 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 VPS54Q9P1Q0 977 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 TFIP11Q9UBB9 837 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 ZBTB21Q9ULJ3 1066 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 KCNJ14Q9UNX9 436 aa9.92□□□□□ -0.82
NUDCD3-209ENST00000487118 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 YEATS4O95619 227 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 ITGBL1O95965 494 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 CAP2P40123 477 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 EPS15P42566 896 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 NASPP49321 788 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 NOSTRINQ8IVI9 506 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 GMCL1Q96IK5 515 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 SPATA32Q96LK8 384 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 DEFB129Q9H1M3 183 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 ADARB2Q9NS39 739 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 PPP2R3BQ9Y5P8 575 aa9.91□□□□□ -0.82
NUDCD3-209ENST00000487118 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 PASKQ96RG2 1323 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 TRPM7Q96QT4 1865 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 A0A1W2PRG0 241 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 BTBD18B2RXH4 712 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 hCG_1984214I3L0E3 225 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 STXBP3O00186 592 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 CALML3P27482 149 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 KRT2P35908 639 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 HIRAP54198 1017 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 ANGEL2Q5VTE6 544 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 SLFN13Q68D06 897 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 WWC2Q6AWC2 1192 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms