RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 MTMR4Q9NYA4 1195 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 CLIP2Q9UDT6 1046 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 SYNPO2Q9UMS6 1093 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 ZNF236Q9UL36 1845 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 BRCA2P51587 3418 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 F5H6K3 240 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 NDUFB10O96000 172 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 KLRC3Q07444 240 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 MAP2K5Q13163 448 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 LRRC47Q8N1G4 583 aaKnown RBP21.73■■□□□ 1.07
CLDN11-206ENST00000486429 SHCBP1Q8NEM2 672 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 USP6NLQ92738 828 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 FBXO28Q9NVF7 368 aa21.73■■□□□ 1.07
CLDN11-206ENST00000486429 SLC15A5A6NIM6 579 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 TSPY2A6NKD2 308 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 FGAP02671 866 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 PTPREP23469 700 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 PLS1Q14651 629 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 PPP4R3BQ5MIZ7 849 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 U2AF1L4Q8WU68 220 aaKnown RBP21.72■■□□□ 1.07
CLDN11-206ENST00000486429 NUP88Q99567 741 aaPredicted RBP21.72■■□□□ 1.07
CLDN11-206ENST00000486429 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.72■■□□□ 1.07
CLDN11-206ENST00000486429 PAK6Q9NQU5 681 aaPredicted RBP21.72■■□□□ 1.07
CLDN11-206ENST00000486429 PPP1R9AQ9ULJ8 1098 aa21.72■■□□□ 1.07
CLDN11-206ENST00000486429 ORC4O43929 436 aa21.71■■□□□ 1.07
CLDN11-206ENST00000486429 GRB14Q14449 540 aa21.71■■□□□ 1.07
CLDN11-206ENST00000486429 CWC27Q6UX04 472 aaKnown RBP21.71■■□□□ 1.07
CLDN11-206ENST00000486429 GMCL1P1Q8NEA9 526 aa21.71■■□□□ 1.07
CLDN11-206ENST00000486429 MKL1Q969V6 931 aa21.71■■□□□ 1.07
CLDN11-206ENST00000486429 DEFB118Q96PH6 123 aa21.71■■□□□ 1.07
CLDN11-206ENST00000486429 ERCC3P19447 782 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 TRIM32Q13049 653 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 TTC22Q5TAA0 569 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 SLF1Q9BQI6 1058 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 MROH8Q9H579 483 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 TOMM22Q9NS69 142 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 COL11A1P12107 1806 aaPredicted RBP21.7■■□□□ 1.06
CLDN11-206ENST00000486429 LAMA4Q16363 1823 aa21.7■■□□□ 1.06
CLDN11-206ENST00000486429 RANBP6O60518 1105 aaKnown RBP21.69■■□□□ 1.06
CLDN11-206ENST00000486429 SGPL1O95470 568 aa21.69■■□□□ 1.06
CLDN11-206ENST00000486429 PRKAR2AP13861 404 aaKnown RBP21.69■■□□□ 1.06
CLDN11-206ENST00000486429 GSPT1P15170 499 aaKnown RBP21.69■■□□□ 1.06
CLDN11-206ENST00000486429 TMEM132BQ14DG7 1078 aa21.69■■□□□ 1.06
CLDN11-206ENST00000486429 NCAPG2Q86XI2 1143 aa21.69■■□□□ 1.06
CLDN11-206ENST00000486429 HMX1Q9NP08 348 aaPredicted RBP21.69■■□□□ 1.06
CLDN11-206ENST00000486429 INCENPQ9NQS7 918 aa21.69■■□□□ 1.06
CLDN11-206ENST00000486429 ADAMTS5Q9UNA0 930 aa21.69■■□□□ 1.06
CLDN11-206ENST00000486429 STX8Q9UNK0 236 aa21.69■■□□□ 1.06
CLDN11-206ENST00000486429 VWA5AO00534 786 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 FGRP09769 529 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 HAND2P61296 217 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 CCL14Q16627 93 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 MAP3K21Q5TCX8 1036 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 PRPF38BQ5VTL8 546 aaKnown RBP21.68■■□□□ 1.06
CLDN11-206ENST00000486429 TACC3Q9Y6A5 838 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 RPTORQ8N122 1335 aa21.68■■□□□ 1.06
CLDN11-206ENST00000486429 STRNO43815 780 aa21.67■■□□□ 1.06
CLDN11-206ENST00000486429 SLC25A27O95847 323 aa21.67■■□□□ 1.06
CLDN11-206ENST00000486429 HOXC6P09630 235 aa21.67■■□□□ 1.06
CLDN11-206ENST00000486429 CAPN2P17655 700 aa21.67■■□□□ 1.06
CLDN11-206ENST00000486429 ADORA2AP29274 412 aa21.67■■□□□ 1.06
CLDN11-206ENST00000486429 RRP12Q5JTH9 1297 aaKnown RBP21.67■■□□□ 1.06
CLDN11-206ENST00000486429 SLFN13Q68D06 897 aa21.67■■□□□ 1.06
CLDN11-206ENST00000486429 ZNF214Q9UL59 606 aaPredicted RBP21.67■■□□□ 1.06
CLDN11-206ENST00000486429 ISY1Q9ULR0 285 aaKnown RBP21.67■■□□□ 1.06
CLDN11-206ENST00000486429 NMT2O60551 498 aa21.66■■□□□ 1.06
CLDN11-206ENST00000486429 FARP2O94887 1054 aaPredicted RBP21.66■■□□□ 1.06
CLDN11-206ENST00000486429 PCP11498 1178 aaKnown RBP21.66■■□□□ 1.06
CLDN11-206ENST00000486429 COPB2P35606 906 aa21.66■■□□□ 1.06
CLDN11-206ENST00000486429 REPS2Q8NFH8 660 aa21.66■■□□□ 1.06
CLDN11-206ENST00000486429 TFRCP02786 760 aaKnown RBP21.65■■□□□ 1.06
CLDN11-206ENST00000486429 BMP3P12645 472 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 STAT3P40763 770 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 MFSD14CQ5VZR4 134 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 RIOX2Q8IUF8 465 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 TBC1D10CQ8IV04 446 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 ABRAQ8N0Z2 381 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 PRPF38AQ8NAV1 312 aaKnown RBP21.65■■□□□ 1.06
CLDN11-206ENST00000486429 STAG1Q8WVM7 1258 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 KIFC2Q96AC6 838 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 GMCL1Q96IK5 515 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 TEX13BQ9BXU2 312 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 NBPF3Q9H094 633 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 CRISPLD2Q9H0B8 497 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 RNF41Q9H4P4 317 aaPredicted RBP21.65■■□□□ 1.06
CLDN11-206ENST00000486429 IL17RBQ9NRM6 502 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 FEM1BQ9UK73 627 aa21.65■■□□□ 1.06
CLDN11-206ENST00000486429 MKI67P46013 3256 aaKnown RBP21.64■■□□□ 1.06
CLDN11-206ENST00000486429 RAD50Q92878 1312 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 FCER1AP12319 257 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 CACNB2Q08289 660 aaPredicted RBP21.64■■□□□ 1.05
CLDN11-206ENST00000486429 AKNAD1Q5T1N1 836 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 MFSD6Q6ZSS7 791 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 NPLOC4Q8TAT6 608 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 DSCC1Q9BVC3 393 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 SLC5A4Q9NY91 659 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 FLRT1Q9NZU1 646 aa21.64■■□□□ 1.05
CLDN11-206ENST00000486429 CTDP1Q9Y5B0 961 aaPredicted RBP21.64■■□□□ 1.05
CLDN11-206ENST00000486429 ZNF213O14771 459 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms