RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 FBXO18Q8NFZ0 1043 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 GPT2Q8TD30 523 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 DYNLL2Q96FJ2 89 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 OTUD5Q96G74 571 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 SNCAIPQ9Y6H5 919 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 ATRNL1Q5VV63 1379 aa16.92■□□□□ 0.3
POLR2J3-204ENST00000486319 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 FMNL1O95466 1100 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 UBE2HP62256 183 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 ATL3Q6DD88 541 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 ERO1BQ86YB8 467 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 ALG1Q9BT22 464 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 CFAP45Q9UL16 551 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 ELP1O95163 1332 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 PHF20L1A8MW92 1017 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 TBC1D12O60347 775 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 CDK8P49336 464 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 FOSBP53539 338 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 ANKS1AQ92625 1134 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 PHKBQ93100 1093 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 PI4KBQ9UBF8 816 aa16.91■□□□□ 0.3
POLR2J3-204ENST00000486319 SLURP2P0DP57 97 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 RASA1P20936 1047 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 GTF2A2P52657 109 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 GUCY1B3Q02153 619 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 TROAPQ12815 778 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 TRIM29Q14134 588 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 FAM173BQ6P4H8 233 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 IFNL1Q8IU54 200 aa16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR2J3-204ENST00000486319 DEXIO95424 95 aa16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 ALDH1A1P00352 501 aa16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 OTUD7BQ6GQQ9 843 aa16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 CRACR2BQ8N4Y2 399 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 SYAP1Q96A49 352 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 RNF26Q9BY78 433 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
POLR2J3-204ENST00000486319 IRF6O14896 467 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 NMT2O60551 498 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 GADD45BO75293 160 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 PPATQ06203 517 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 BRAPQ7Z569 592 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 SLC44A5Q8NCS7 719 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 SPATA32Q96LK8 384 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 HERC5Q9UII4 1024 aaKnown RBP16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-204ENST00000486319 TESPA1A2RU30 521 aaPredicted RBP16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 KIF5BP33176 963 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 PPIL2Q13356 520 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 SCYL3Q8IZE3 742 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 TNS4Q8IZW8 715 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 NEDD1Q8NHV4 660 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
POLR2J3-204ENST00000486319 CCL15-CCL14A0A0B4J2E2 113 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 IGF2BP3O00425 579 aaKnown RBP eCLIP16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 SNAPC2Q13487 334 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 CCL15Q16663 113 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 KRT40Q6A162 431 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 FOXP4Q8IVH2 680 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 PTPN18Q99952 460 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 CETPP11597 493 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 GABPAQ06546 454 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 TMTC3Q6ZXV5 915 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 BRI3BPQ8WY22 251 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 AIFM3Q96NN9 605 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 EHD4Q9H223 541 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 SERPINB13Q9UIV8 391 aa16.86■□□□□ 0.29
POLR2J3-204ENST00000486319 PLIN4Q96Q06 1357 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 GOLGA6L3A6NEY3 463 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms