RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 GMCL1Q96IK5 515 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 TLL2Q9Y6L7 1015 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 PALM3A6NDB9 673 aaPredicted RBP19.25■□□□□ 0.67
THBS3-207ENST00000486260 C19orf81C9J6K1 198 aa19.25■□□□□ 0.67
THBS3-207ENST00000486260 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
THBS3-207ENST00000486260 WNK4Q96J92 1243 aa19.25■□□□□ 0.67
THBS3-207ENST00000486260 GPCPD1Q9NPB8 672 aa19.25■□□□□ 0.67
THBS3-207ENST00000486260 RBM28Q9NW13 759 aaKnown RBP19.25■□□□□ 0.67
THBS3-207ENST00000486260 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
THBS3-207ENST00000486260 CCDC196A0A1B0GTZ2 297 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 PLEKHA8P1O95397 391 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 PPP2R5BQ15173 497 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 ABT1Q9ULW3 272 aaKnown RBP19.24■□□□□ 0.67
THBS3-207ENST00000486260 CXCL11O14625 94 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 CPLX1O14810 134 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 PPFIA3O75145 1194 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 CTDNEP1O95476 244 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 BMP3P12645 472 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 MKRN3Q13064 507 aaKnown RBP19.24■□□□□ 0.67
THBS3-207ENST00000486260 FAM83BQ5T0W9 1011 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 TTBK2Q6IQ55 1244 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 CCDC82Q8N4S0 544 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 SPRYD3Q8NCJ5 442 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 LPAR1Q92633 364 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 CPVLQ9H3G5 476 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 KCNH4Q9UQ05 1017 aa19.24■□□□□ 0.67
THBS3-207ENST00000486260 KLRF2D3W0D1 207 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 DHX16O60231 1041 aaKnown RBP19.23■□□□□ 0.67
THBS3-207ENST00000486260 ZNF157P51786 506 aaPredicted RBP19.23■□□□□ 0.67
THBS3-207ENST00000486260 NTRK3Q16288 839 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 SH3D19Q5HYK7 790 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 GPATCH4Q5T3I0 446 aaKnown RBP19.23■□□□□ 0.67
THBS3-207ENST00000486260 TMTC3Q6ZXV5 915 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 NBPF11Q86T75 865 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 SRBD1Q8N5C6 995 aaKnown RBP19.23■□□□□ 0.67
THBS3-207ENST00000486260 C12orf42Q96LP6 360 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
THBS3-207ENST00000486260 A0A0G2JLL6 359 aaPredicted RBP19.22■□□□□ 0.67
THBS3-207ENST00000486260 HSP90AA1P07900 732 aaKnown RBP19.22■□□□□ 0.67
THBS3-207ENST00000486260 VCAM1P19320 739 aa19.22■□□□□ 0.67
THBS3-207ENST00000486260 GNAQP50148 359 aa19.22■□□□□ 0.67
THBS3-207ENST00000486260 SPRYD7Q5W111 196 aa19.22■□□□□ 0.67
THBS3-207ENST00000486260 RGMBQ6NW40 437 aa19.22■□□□□ 0.67
THBS3-207ENST00000486260 PRRT2Q7Z6L0 340 aaPredicted RBP19.22■□□□□ 0.67
THBS3-207ENST00000486260 PTPRFP10586 1907 aa19.22■□□□□ 0.67
THBS3-207ENST00000486260 TMEM232C9JQI7 657 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 WDR46O15213 610 aaKnown RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 JAK2O60674 1132 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 SLC16A2P36021 539 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 SLC35G1Q2M3R5 365 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 PHKBQ93100 1093 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 APLP1P51693 650 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 FUT2Q10981 343 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 SNAPC2Q13487 334 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 CPLX2Q6PUV4 134 aaKnown RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 GADL1Q6ZQY3 521 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 RASAL3Q86YV0 1011 aa19.21■□□□□ 0.67
THBS3-207ENST00000486260 RPAP3Q9H6T3 665 aaPredicted RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.21■□□□□ 0.67
THBS3-207ENST00000486260 CYTH3O43739 400 aa19.2■□□□□ 0.66
THBS3-207ENST00000486260 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
THBS3-207ENST00000486260 IFNAR1P17181 557 aa19.2■□□□□ 0.66
THBS3-207ENST00000486260 INTS4Q96HW7 963 aaKnown RBP19.2■□□□□ 0.66
THBS3-207ENST00000486260 LZTS2Q9BRK4 669 aa19.2■□□□□ 0.66
THBS3-207ENST00000486260 LLPHQ9BRT6 129 aaKnown RBP19.2■□□□□ 0.66
THBS3-207ENST00000486260 PTPDC1A2A3K4 754 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 CDKL5O76039 1030 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 IKQ13123 557 aaPredicted RBP19.19■□□□□ 0.66
THBS3-207ENST00000486260 MOGSQ13724 837 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 DDX11Q96FC9 970 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 MS4A4AQ96JQ5 239 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 VAT1LQ9HCJ6 419 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 STAT2P52630 851 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 GTF2A2P52657 109 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 TREML2Q5T2D2 321 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 PROCA1Q8NCQ7 364 aaPredicted RBP19.19■□□□□ 0.66
THBS3-207ENST00000486260 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 PIBF1Q8WXW3 757 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 HHIPL1Q96JK4 782 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 SLC26A6Q9BXS9 759 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 CREBZFQ9NS37 354 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 FBXO28Q9NVF7 368 aa19.19■□□□□ 0.66
THBS3-207ENST00000486260 CNTNAP5Q8WYK1 1306 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 hCG_1642624A0A1W2PR95 340 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 SSRP1Q08945 709 aaKnown RBP19.18■□□□□ 0.66
THBS3-207ENST00000486260 SAMD1Q6SPF0 538 aaPredicted RBP19.18■□□□□ 0.66
THBS3-207ENST00000486260 BTNL9Q6UXG8 535 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 SPZ1Q9BXG8 430 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 RIOX1Q9H6W3 641 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 SMC3Q9UQE7 1217 aa19.18■□□□□ 0.66
THBS3-207ENST00000486260 BAZ2BQ9UIF8 2168 aaKnown RBP19.18■□□□□ 0.66
THBS3-207ENST00000486260 LOC285556D6RIA3 1793 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms