RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 GPATCH11Q8N954 259 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 ANKFY1Q9P2R3 1169 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 RAPGEF6Q8TEU7 1601 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 CASQ2O14958 399 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 RPS6KA1Q15418 735 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 KRT40Q6A162 431 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 GPBP1Q86WP2 473 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 IQCDQ96DY2 449 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 ZBTB40Q9NUA8 1239 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 LARSQ9P2J5 1176 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 CCPG1Q9ULG6 757 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 STAT1P42224 750 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 HPDP32754 393 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 PTPRKQ15262 1439 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 METTL23Q86XA0 190 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 TMTC1Q8IUR5 882 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 CACNA2D3Q8IZS8 1091 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 ARHGAP24Q8N264 748 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 PHKBQ93100 1093 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 VCXQ9H320 206 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 FAM114A2Q9NRY5 505 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 PCDHA12Q9UN75 941 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 AOX1Q06278 1338 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 SORBS3O60504 671 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 CPA1P15085 419 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 DIXDC1Q155Q3 683 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 RUFY4Q6ZNE9 571 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 CTAGE3PQ8IX95 158 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 SKA2Q8WVK7 121 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 P3H4Q92791 437 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 IPO11Q9UI26 975 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-207ENST00000485983 LRRIQ4A6NIV6 560 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 USP14P54578 494 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 RNASELQ05823 741 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ABCB5Q2M3G0 1257 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 PLA2G4DQ86XP0 818 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ABCC10Q5T3U5 1492 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 NELFBQ8WX92 580 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 MCUR1Q96AQ8 359 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 VPS37BQ9H9H4 285 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 K7ENM7 598 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 RBBP5Q15291 538 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 SLFN13Q68D06 897 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 SEPT14Q6ZU15 432 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ARHGEF37A1IGU5 675 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 KRT10P13645 584 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ATP11AP98196 1134 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 PALM2Q8IXS6 379 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 PARD3BQ8TEW8 1205 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 RIC8AQ9NPQ8 531 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 TAB2Q9NYJ8 693 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 VPS54Q9P1Q0 977 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 KCNJ14Q9UNX9 436 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 TBC1D8O95759 1140 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ZNF131P52739 623 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 TPCN1Q9ULQ1 816 aa11.64□□□□□ -0.55
SRGAP3-207ENST00000485983 ZSCAN20P17040 1043 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 ERCC3P19447 782 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 BTDP43251 543 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 TSTA3Q13630 321 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 AOC3Q16853 763 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 FAM178BQ8IXR5 827 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 C10orf67Q8IYJ2 551 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 CSRNP1Q96S65 589 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 APOL6Q9BWW8 343 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 LMCD1Q9NZU5 365 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 PARP2Q9UGN5 583 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 BCAP29Q9UHQ4 241 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 TNNQ9UQP3 1299 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 POSTNQ15063 836 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 PPP2R5AQ15172 486 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 ZNF654Q8IZM8 581 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 MYOCDQ8IZQ8 938 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 PPP4R1Q8TF05 950 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 TRAPPC8Q9Y2L5 1435 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 FRMPD2Q68DX3 1309 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 TMEM232C9JQI7 657 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 TMC4Q7Z404 712 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
SRGAP3-207ENST00000485983 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms