RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 CPA4Q9UI42 421 aa27.73■■■□□ 2.03
ABCF3-216ENST00000485921 GPR25O00155 361 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 FLOT1O75955 427 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 BMP3P12645 472 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 PSMA5P28066 241 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 EXOSC10Q01780 885 aaKnown RBP27.72■■■□□ 2.03
ABCF3-216ENST00000485921 C17orf99Q6UX52 265 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 DCAF4Q8WV16 495 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 SENP2Q9HC62 589 aa27.72■■■□□ 2.03
ABCF3-216ENST00000485921 ISY1Q9ULR0 285 aaKnown RBP27.72■■■□□ 2.03
ABCF3-216ENST00000485921 WDR19Q8NEZ3 1342 aa27.71■■■□□ 2.03
ABCF3-216ENST00000485921 GCLCP48506 637 aaPredicted RBP27.71■■■□□ 2.03
ABCF3-216ENST00000485921 RASGRP2Q7LDG7 609 aa27.71■■■□□ 2.03
ABCF3-216ENST00000485921 LRRC2Q9BYS8 371 aa27.71■■■□□ 2.03
ABCF3-216ENST00000485921 GPHNQ9NQX3 736 aaPredicted RBP27.71■■■□□ 2.03
ABCF3-216ENST00000485921 FBXO28Q9NVF7 368 aa27.71■■■□□ 2.03
ABCF3-216ENST00000485921 HOXC10Q9NYD6 342 aa27.71■■■□□ 2.03
ABCF3-216ENST00000485921 SH2B2O14492 632 aaPredicted RBP27.7■■■□□ 2.02
ABCF3-216ENST00000485921 CPA1P15085 419 aa27.7■■■□□ 2.02
ABCF3-216ENST00000485921 LBX1P52954 281 aa27.7■■■□□ 2.02
ABCF3-216ENST00000485921 NOM1Q5C9Z4 860 aaKnown RBP27.7■■■□□ 2.02
ABCF3-216ENST00000485921 BLOC1S2Q6QNY1 142 aa27.7■■■□□ 2.02
ABCF3-216ENST00000485921 SAMD1Q6SPF0 538 aaPredicted RBP27.7■■■□□ 2.02
ABCF3-216ENST00000485921 TCEANC2Q96MN5 208 aa27.7■■■□□ 2.02
ABCF3-216ENST00000485921 LY9Q9HBG7 655 aa27.7■■■□□ 2.02
ABCF3-216ENST00000485921 SPDYE16A6NNV3 312 aaPredicted RBP27.69■■■□□ 2.02
ABCF3-216ENST00000485921 PDHBP11177 359 aa27.69■■■□□ 2.02
ABCF3-216ENST00000485921 CASTP20810 708 aaKnown RBP27.69■■■□□ 2.02
ABCF3-216ENST00000485921 DSG3P32926 999 aa27.69■■■□□ 2.02
ABCF3-216ENST00000485921 CCDC96Q2M329 555 aa27.69■■■□□ 2.02
ABCF3-216ENST00000485921 KCTD1Q719H9 257 aa27.69■■■□□ 2.02
ABCF3-216ENST00000485921 ANKRD13CQ8N6S4 541 aa27.69■■■□□ 2.02
ABCF3-216ENST00000485921 GTF3C2Q8WUA4 911 aaPredicted RBP27.69■■■□□ 2.02
ABCF3-216ENST00000485921 FEM1BQ9UK73 627 aa27.69■■■□□ 2.02
ABCF3-216ENST00000485921 TMEM232C9JQI7 657 aa27.68■■■□□ 2.02
ABCF3-216ENST00000485921 BCRP11274 1271 aa27.68■■■□□ 2.02
ABCF3-216ENST00000485921 ANAPC15P60006 121 aa27.68■■■□□ 2.02
ABCF3-216ENST00000485921 TMTC2Q8N394 836 aa27.68■■■□□ 2.02
ABCF3-216ENST00000485921 MYPNQ86TC9 1320 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 FKTNO75072 461 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 SNHG28P0DPA3 235 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 RPS6KB1P23443 525 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 LIFRP42702 1097 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 POTEEQ6S8J3 1075 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 LBX2Q6XYB7 198 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 ZNF296Q8WUU4 475 aaPredicted RBP27.67■■■□□ 2.02
ABCF3-216ENST00000485921 SLF1Q9BQI6 1058 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 TM6SF1Q9BZW5 370 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 ZSWIM6Q9HCJ5 1215 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 RBPJLQ9UBG7 517 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 PPP1R9AQ9ULJ8 1098 aa27.67■■■□□ 2.02
ABCF3-216ENST00000485921 FRMPD2Q68DX3 1309 aaPredicted RBP27.67■■■□□ 2.02
ABCF3-216ENST00000485921 SP3Q02447 781 aa27.66■■■□□ 2.02
ABCF3-216ENST00000485921 NFXL1Q6ZNB6 911 aa27.66■■■□□ 2.02
ABCF3-216ENST00000485921 PRPF38AQ8NAV1 312 aaKnown RBP27.66■■■□□ 2.02
ABCF3-216ENST00000485921 CHURC1Q8WUH1 139 aa27.66■■■□□ 2.02
ABCF3-216ENST00000485921 ATG4CQ96DT6 458 aa27.66■■■□□ 2.02
ABCF3-216ENST00000485921 PAGR1Q9BTK6 254 aa27.66■■■□□ 2.02
ABCF3-216ENST00000485921 GPCPD1Q9NPB8 672 aa27.66■■■□□ 2.02
ABCF3-216ENST00000485921 CCDC69A6NI79 296 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 PEX10O60683 326 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 STAT2P52630 851 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 ZNF543Q08ER8 600 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 IKQ13123 557 aaPredicted RBP27.65■■■□□ 2.02
ABCF3-216ENST00000485921 FAM110CQ1W6H9 321 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 RUFY3Q7L099 469 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 CATIPQ7Z7H3 387 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 FAM160B2Q86V87 743 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 KIFC2Q96AC6 838 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 TXNRD2Q9NNW7 524 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 RABGAP1Q9Y3P9 1069 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 CYP46A1Q9Y6A2 500 aa27.65■■■□□ 2.02
ABCF3-216ENST00000485921 PLA2G6O60733 806 aa27.64■■■□□ 2.02
ABCF3-216ENST00000485921 FGD1P98174 961 aa27.64■■■□□ 2.02
ABCF3-216ENST00000485921 MORF4L1Q9UBU8 362 aa27.64■■■□□ 2.02
ABCF3-216ENST00000485921 ADAMTS5Q9UNA0 930 aa27.64■■■□□ 2.02
ABCF3-216ENST00000485921 RLFQ13129 1914 aa27.64■■■□□ 2.02
ABCF3-216ENST00000485921 CNMDO75829 334 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 PARP1P09874 1014 aaKnown RBP27.63■■■□□ 2.01
ABCF3-216ENST00000485921 GOLGA8HP0CJ92 632 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 GPATCH4Q5T3I0 446 aaKnown RBP27.63■■■□□ 2.01
ABCF3-216ENST00000485921 TTBK2Q6IQ55 1244 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 Q6ZUG5 572 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 MB21D1Q8N884 522 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 GPRC5AQ8NFJ5 357 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 IL17RAQ96F46 866 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 UPF3BQ9BZI7 483 aaKnown RBP27.63■■■□□ 2.01
ABCF3-216ENST00000485921 BTBD7Q9P203 1132 aa27.63■■■□□ 2.01
ABCF3-216ENST00000485921 VWA5AO00534 786 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 TROAPQ12815 778 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 ASPRV1Q53RT3 343 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 SGMS1Q86VZ5 419 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 ZNF654Q8IZM8 581 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 BACH2Q9BYV9 841 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 C22orf23Q9BZE7 217 aa27.62■■■□□ 2.01
ABCF3-216ENST00000485921 UPF2Q9HAU5 1272 aaKnown RBP27.62■■■□□ 2.01
ABCF3-216ENST00000485921 SLC16A2P36021 539 aa27.61■■■□□ 2.01
ABCF3-216ENST00000485921 ERVK-9P63128 1117 aa27.61■■■□□ 2.01
ABCF3-216ENST00000485921 ERVK-24P63145 666 aa27.61■■■□□ 2.01
ABCF3-216ENST00000485921 LACTBP83111 547 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms