RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■□□□□ 10.4
SND1-212ENST00000485871 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
SND1-212ENST00000485871 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
SND1-212ENST00000485871 ZKSCAN4Q969J2 545 aaPredicted RBP13.17□□□□□ -0.3
SND1-212ENST00000485871 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 SNCAIPQ9Y6H5 919 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 F5H6K3 240 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 CYTH3O43739 400 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 PTPRAP18433 802 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 KIF5BP33176 963 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
SND1-212ENST00000485871 KLRC3Q07444 240 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 PKP1Q13835 747 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
SND1-212ENST00000485871 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
SND1-212ENST00000485871 CPLX1O14810 134 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
SND1-212ENST00000485871 NDUFB10O96000 172 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 NF2P35240 595 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 VGLL4Q14135 290 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 LDLRAD1Q5T700 205 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 PHKBQ93100 1093 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
SND1-212ENST00000485871 MCOLN1Q9GZU1 580 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 ZDHHC9Q9Y397 364 aa13.15□□□□□ -0.3
SND1-212ENST00000485871 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
SND1-212ENST00000485871 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
SND1-212ENST00000485871 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 CDKL5O76039 1030 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
SND1-212ENST00000485871 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 GNAQP50148 359 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 PRKG1Q13976 671 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 PKN1Q16512 942 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 CPLX2Q6PUV4 134 aaKnown RBP13.14□□□□□ -0.31
SND1-212ENST00000485871 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 RIOX1Q9H6W3 641 aa13.14□□□□□ -0.31
SND1-212ENST00000485871 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
SND1-212ENST00000485871 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
SND1-212ENST00000485871 TCHHQ07283 1943 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 SYT1P21579 422 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 MCM4P33991 863 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 DEKP35659 375 aaKnown RBP13.13□□□□□ -0.31
SND1-212ENST00000485871 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
SND1-212ENST00000485871 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
SND1-212ENST00000485871 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 ANKRD13AQ8IZ07 590 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 C12orf42Q96LP6 360 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 SLC26A6Q9BXS9 759 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 CPVLQ9H3G5 476 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 MTMR6Q9Y217 621 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 AFG3L2Q9Y4W6 797 aa13.13□□□□□ -0.31
SND1-212ENST00000485871 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
SND1-212ENST00000485871 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 BRD1O95696 1058 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 MAP2K2P36507 400 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 SLC1A4P43007 532 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
SND1-212ENST00000485871 DGKZQ13574 1117 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 GSE1Q14687 1217 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
SND1-212ENST00000485871 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 NUP88Q99567 741 aaPredicted RBP13.12□□□□□ -0.31
SND1-212ENST00000485871 UBA5Q9GZZ9 404 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
SND1-212ENST00000485871 AS3MTQ9HBK9 375 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms