RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 TLR2O60603 784 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 GADL1Q6ZQY3 521 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 UBE2Q1Q7Z7E8 422 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 RALYLQ86SE5 291 aaKnown RBP14.39□□□□□ -0.11
TRA2B-213ENST00000485530 DGKHQ86XP1 1220 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 SPICE1Q8N0Z3 855 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 C12orf42Q96LP6 360 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 ARHGEF10LQ9HCE6 1279 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 TNKSO95271 1327 aa14.39□□□□□ -0.11
TRA2B-213ENST00000485530 IFIT3O14879 490 aaKnown RBP14.38□□□□□ -0.11
TRA2B-213ENST00000485530 MCM5P33992 734 aa14.38□□□□□ -0.11
TRA2B-213ENST00000485530 NT5C2P49902 561 aa14.38□□□□□ -0.11
TRA2B-213ENST00000485530 KRT32Q14532 448 aa14.38□□□□□ -0.11
TRA2B-213ENST00000485530 DHX32Q7L7V1 743 aaKnown RBP14.38□□□□□ -0.11
TRA2B-213ENST00000485530 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
TRA2B-213ENST00000485530 NUP88Q99567 741 aaPredicted RBP14.38□□□□□ -0.11
TRA2B-213ENST00000485530 FEZ1Q99689 392 aa14.38□□□□□ -0.11
TRA2B-213ENST00000485530 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
TRA2B-213ENST00000485530 PDHXO00330 501 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 NDUFB10O96000 172 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 GNRH1P01148 92 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 TOP1P11387 765 aaKnown RBP14.37□□□□□ -0.11
TRA2B-213ENST00000485530 VCAM1P19320 739 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 PRMT2P55345 433 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 KIF22Q14807 665 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 IQCA1Q86XH1 822 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
TRA2B-213ENST00000485530 C22orf23Q9BZE7 217 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 AGTPBP1Q9UPW5 1226 aa14.37□□□□□ -0.11
TRA2B-213ENST00000485530 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 CYP2C8P10632 490 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 CASTP20810 708 aaKnown RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 RPS6KB1P23443 525 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 MCCP23508 829 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 CTGFP29279 349 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 HOXA7P31268 230 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 RBM25P49756 843 aaKnown RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 USP14P54578 494 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 ANAPC15P60006 121 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 UBAC1Q9BSL1 405 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 HTATIP2Q9BUP3 242 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 TM6SF1Q9BZW5 370 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
TRA2B-213ENST00000485530 TMOD4Q9NZQ9 345 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 MYH8P13535 1937 aa14.36□□□□□ -0.11
TRA2B-213ENST00000485530 SOX1O00570 391 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-213ENST00000485530 PEX10O60683 326 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 GJA8P48165 433 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 CCDC178Q5BJE1 867 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 CATSPERGQ6ZRH7 1159 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 ASCC2Q9H1I8 757 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-213ENST00000485530 FBXO28Q9NVF7 368 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 SYNPO2Q9UMS6 1093 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 MTMR7Q9Y216 660 aa14.35□□□□□ -0.11
TRA2B-213ENST00000485530 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 RAD21O60216 631 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
TRA2B-213ENST00000485530 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-213ENST00000485530 HMGB1P09429 215 aaKnown RBP14.34□□□□□ -0.11
TRA2B-213ENST00000485530 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 PDHBP11177 359 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 PSMA5P28066 241 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 WTAPQ15007 396 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
TRA2B-213ENST00000485530 TTBK2Q6IQ55 1244 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 Q6ZUG5 572 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 LPAR1Q92633 364 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 LRCH3Q96II8 777 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 GMCL1Q96IK5 515 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
TRA2B-213ENST00000485530 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 AGXT2Q9BYV1 514 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 SLC45A1Q9Y2W3 748 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 PTPRFP10586 1907 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 WDR19Q8NEZ3 1342 aa14.34□□□□□ -0.11
TRA2B-213ENST00000485530 USP17L15C9J2P7 530 aa14.33□□□□□ -0.12
TRA2B-213ENST00000485530 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.12
TRA2B-213ENST00000485530 USP17L11C9JVI0 530 aa14.33□□□□□ -0.12
TRA2B-213ENST00000485530 USP17L18D6R9N7 530 aa14.33□□□□□ -0.12
TRA2B-213ENST00000485530 USP17L22D6RA61 530 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms