RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 IMPDH2P12268 514 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 NBPF12Q5TAG4 269 aaPredicted RBP7.09□□□□□ -1.27
SMC4-215ENST00000484799 HOMEZQ8IX15 550 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 DAGLBQ8NCG7 672 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 RNF34Q969K3 372 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 CNNM2Q9H8M5 875 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 CWC22Q9HCG8 908 aaKnown RBP7.09□□□□□ -1.27
SMC4-215ENST00000484799 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 TCAF2A6NFQ2 919 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 UBOX5O94941 541 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 CRKP46108 304 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 JAG1P78504 1218 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 SNX17Q15036 470 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 SLC26A8Q96RN1 970 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 TCFL5Q9UL49 500 aa7.08□□□□□ -1.28
SMC4-215ENST00000484799 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.07□□□□□ -1.28
SMC4-215ENST00000484799 SYPP08247 313 aa7.07□□□□□ -1.28
SMC4-215ENST00000484799 POLR2BP30876 1174 aaKnown RBP7.07□□□□□ -1.28
SMC4-215ENST00000484799 TCTN2Q96GX1 697 aa7.07□□□□□ -1.28
SMC4-215ENST00000484799 ZNF512BQ96KM6 892 aaPredicted RBP7.07□□□□□ -1.28
SMC4-215ENST00000484799 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
SMC4-215ENST00000484799 RNF32Q9H0A6 362 aa7.07□□□□□ -1.28
SMC4-215ENST00000484799 METTL5Q9NRN9 209 aaKnown RBP7.07□□□□□ -1.28
SMC4-215ENST00000484799 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
SMC4-215ENST00000484799 MEIS1O00470 390 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 FKTNO75072 461 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 NME1P15531 152 aaKnown RBP7.06□□□□□ -1.28
SMC4-215ENST00000484799 ENDOUP21128 410 aaKnown RBP7.06□□□□□ -1.28
SMC4-215ENST00000484799 SLITRK4Q8IW52 837 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 CCDC144CPQ8IYA2 1237 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 USHBP1Q8N6Y0 703 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 VWCEQ96DN2 955 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 EAF1Q96JC9 268 aaPredicted RBP7.06□□□□□ -1.28
SMC4-215ENST00000484799 DSCC1Q9BVC3 393 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 CHST7Q9NS84 486 aa7.06□□□□□ -1.28
SMC4-215ENST00000484799 A0A1W2PQ27 194 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 A0A1W2PQ64 194 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 A0A1W2PQC6 194 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 A0A1W2PQD8 194 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 FAM86C2PA6NEL3 165 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 TSPAN15O95858 294 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 TEKQ02763 1124 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 NR0B2Q15466 257 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 NOL9Q5SY16 702 aaKnown RBP7.05□□□□□ -1.28
SMC4-215ENST00000484799 CWF19L1Q69YN2 538 aaKnown RBP7.05□□□□□ -1.28
SMC4-215ENST00000484799 TMC3Q7Z5M5 1100 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 ZNF605Q86T29 641 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 SIRT2Q8IXJ6 389 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 SLC6A18Q96N87 628 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 PRDM14Q9GZV8 571 aa7.05□□□□□ -1.28
SMC4-215ENST00000484799 SIGLEC6O43699 453 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 PRAMEF1O95521 474 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 C1QTNF9P0C862 333 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 ATG14Q6ZNE5 492 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 CEP128Q6ZU80 1094 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 IRF2BP1Q8IU81 584 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 LINC00116Q8NCU8 138 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 HDAC8Q9BY41 377 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 ANTXR1Q9H6X2 564 aa7.04□□□□□ -1.28
SMC4-215ENST00000484799 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
SMC4-215ENST00000484799 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
SMC4-215ENST00000484799 INTS4Q96HW7 963 aaKnown RBP7.03□□□□□ -1.28
SMC4-215ENST00000484799 CDADC1Q9BWV3 514 aa7.03□□□□□ -1.28
SMC4-215ENST00000484799 YBX2Q9Y2T7 364 aaKnown RBP7.03□□□□□ -1.28
SMC4-215ENST00000484799 OR14I1A6ND48 311 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 SCAMP3O14828 347 aaKnown RBP7.02□□□□□ -1.29
SMC4-215ENST00000484799 PSPNO60542 156 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 ARL4AP40617 200 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 KIR2DL1P43626 348 aaPredicted RBP7.02□□□□□ -1.29
SMC4-215ENST00000484799 KIR2DL2P43627 348 aaPredicted RBP7.02□□□□□ -1.29
SMC4-215ENST00000484799 AUHQ13825 339 aaKnown RBP7.02□□□□□ -1.29
SMC4-215ENST00000484799 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 CIAPIN1Q6FI81 312 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 TMEM192Q8IY95 271 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 LRRC56Q8IYG6 542 aaPredicted RBP7.02□□□□□ -1.29
SMC4-215ENST00000484799 SLC9A7Q96T83 725 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 KCNK12Q9HB15 430 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 PCDHGB7Q9Y5F8 929 aa7.02□□□□□ -1.29
SMC4-215ENST00000484799 MEIS3P2A8K0S8 358 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 ETV2O00321 342 aaPredicted RBP7.01□□□□□ -1.29
SMC4-215ENST00000484799 TNFRSF10CO14798 259 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 NOP2P46087 812 aaKnown RBP7.01□□□□□ -1.29
SMC4-215ENST00000484799 RTP1P59025 263 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 FANCCQ00597 558 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 SNW1Q13573 536 aaKnown RBP7.01□□□□□ -1.29
SMC4-215ENST00000484799 ADGRF1Q5T601 910 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 OLFML2BQ68BL8 750 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 NAT16Q8N8M0 369 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 LINC01599Q8WXQ3 324 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 SPATA32Q96LK8 384 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 TM9SF2Q99805 663 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 SIRT5Q9NXA8 310 aa7.01□□□□□ -1.29
SMC4-215ENST00000484799 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms