RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 RBM27Q9P2N5 1060 aaKnown RBP23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 ZDHHC9Q9Y397 364 aa23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 SMARCA1P28370 1054 aa23.71■■□□□ 1.39
VCPKMT-203ENST00000484763 ALG1Q9BT22 464 aa23.71■■□□□ 1.39
VCPKMT-203ENST00000484763 MTMR6Q9Y217 621 aa23.71■■□□□ 1.39
VCPKMT-203ENST00000484763 PHIPQ8WWQ0 1821 aa23.71■■□□□ 1.39
VCPKMT-203ENST00000484763 H3BQV1 296 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 PTPRAP18433 802 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 IFFO2Q5TF58 517 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 C8orf76Q96K31 380 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 FEZ1Q99689 392 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 VCPKMTQ9H867 229 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 AS3MTQ9HBK9 375 aa23.7■■□□□ 1.39
VCPKMT-203ENST00000484763 BAZ2BQ9UIF8 2168 aaKnown RBP23.7■■□□□ 1.38
VCPKMT-203ENST00000484763 ZSCAN22P10073 491 aaPredicted RBP23.7■■□□□ 1.38
VCPKMT-203ENST00000484763 MAP3K9P80192 1104 aa23.7■■□□□ 1.38
VCPKMT-203ENST00000484763 V9GY48 417 aaPredicted RBP23.7■■□□□ 1.38
VCPKMT-203ENST00000484763 UBE2Q2LH0YL09 131 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 FOSBP53539 338 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 KCTD1Q719H9 257 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 RGS22Q8NE09 1264 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 AIFM3Q96NN9 605 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 GPCPD1Q9NPB8 672 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 ISY1Q9ULR0 285 aaKnown RBP23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 CSADQ9Y600 493 aa23.69■■□□□ 1.38
VCPKMT-203ENST00000484763 CYTH3O43739 400 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 VGLL4Q14135 290 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 MAP3K11Q16584 847 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 WDR18Q9BV38 432 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 BMP3P12645 472 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 TTLL12Q14166 644 aaPredicted RBP23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 PKN1Q16512 942 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 SLC35G1Q2M3R5 365 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 KIAA1683Q9H0B3 1180 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 SNCAIPQ9Y6H5 919 aa23.68■■□□□ 1.38
VCPKMT-203ENST00000484763 hCG_1642624A0A1W2PR95 340 aa23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 ZYXQ15942 572 aaKnown RBP23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 FOXD4L5Q5VV16 416 aaPredicted RBP23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 ARMC9Q7Z3E5 817 aa23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 SPICE1Q8N0Z3 855 aa23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 FBXO18Q8NFZ0 1043 aa23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 FOXD4L4Q8WXT5 416 aaPredicted RBP23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 TNPO1Q92973 898 aaKnown RBP23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 CPVLQ9H3G5 476 aa23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 RIOX1Q9H6W3 641 aa23.67■■□□□ 1.38
VCPKMT-203ENST00000484763 USP17L10C9JJH3 530 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 TRAF5O00463 557 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 TRIM29Q14134 588 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 ZNF280CQ8ND82 737 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 UBA5Q9GZZ9 404 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 F13A1P00488 732 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 SCG2P13521 617 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 USP14P54578 494 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 PFKFB3Q16875 520 aaPredicted RBP23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 KIAA1755Q5JYT7 1200 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 TTBK2Q6IQ55 1244 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 LPAR1Q92633 364 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 RRP36Q96EU6 259 aaKnown RBP23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 NUP88Q99567 741 aaPredicted RBP23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 ZHX2Q9Y6X8 837 aa23.66■■□□□ 1.38
VCPKMT-203ENST00000484763 XBP1P17861 261 aa23.65■■□□□ 1.38
VCPKMT-203ENST00000484763 GUCY1B3Q02153 619 aa23.65■■□□□ 1.38
VCPKMT-203ENST00000484763 MTMR2Q13614 643 aa23.65■■□□□ 1.38
VCPKMT-203ENST00000484763 PIBF1Q8WXW3 757 aa23.65■■□□□ 1.38
VCPKMT-203ENST00000484763 SPP2Q13103 211 aa23.64■■□□□ 1.38
VCPKMT-203ENST00000484763 SEC63Q9UGP8 760 aaKnown RBP23.64■■□□□ 1.38
VCPKMT-203ENST00000484763 BACE1P56817 501 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 FAM83BQ5T0W9 1011 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 KRT40Q6A162 431 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 OTUD7BQ6GQQ9 843 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 MOB2Q70IA6 237 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 ADGRF4Q8IZF3 695 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 ZNF408Q9H9D4 720 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 GJB4Q9NTQ9 266 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 TMEM232C9JQI7 657 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 SLC16A2P36021 539 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 CHADLQ6NUI6 762 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 HOMER1Q86YM7 354 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 VAT1LQ9HCJ6 419 aa23.63■■□□□ 1.37
VCPKMT-203ENST00000484763 TRIM75PA6NK02 468 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 WDR46O15213 610 aaKnown RBP23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 STAT2P52630 851 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 IKQ13123 557 aaPredicted RBP23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 BTNL9Q6UXG8 535 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 PIGSQ96S52 555 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 JMJD4Q9H9V9 463 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 AFG3L2Q9Y4W6 797 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 ATP6V1DQ9Y5K8 247 aa23.62■■□□□ 1.37
VCPKMT-203ENST00000484763 C19orf81C9J6K1 198 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 FMR1Q06787 632 aaKnown RBP eCLIP23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 FERMT3Q86UX7 667 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 ELP3Q9H9T3 547 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 VPS54Q9P1Q0 977 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 PTPRFP10586 1907 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 FKBP1BP68106 108 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 MCTP1Q6DN14 999 aa23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 GPBP1L1Q9HC44 474 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-203ENST00000484763 UNCXA6NJT0 531 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms