RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 CENPFP49454 3210 aa18.85■□□□□ 0.61
UBE2E1-209ENST00000484048 PPP1R12BO60237 982 aaPredicted RBP18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 SCRN1Q12765 414 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 TROAPQ12815 778 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 PRKG1Q13976 671 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 MAP3K11Q16584 847 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 MICU3Q86XE3 530 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 SCYL3Q8IZE3 742 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 NECAB1Q8N987 351 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 MYL10Q9BUA6 226 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 PARP14Q460N5 1801 aa18.84■□□□□ 0.61
UBE2E1-209ENST00000484048 CALM1P0DP23 149 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 CALM2P0DP24 149 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 CALM3P0DP25 149 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 IREB2P48200 963 aaKnown RBP18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 SLC4A3P48751 1232 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 METAP2P50579 478 aaKnown RBP eCLIP18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 LDLRAD1Q5T700 205 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 RAB11FIP4Q86YS3 637 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 CCDC83Q8IWF9 413 aa18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.83■□□□□ 0.6
UBE2E1-209ENST00000484048 GOLGA8AA7E2F4 631 aa18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 IGF2BP3O00425 579 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 RXRAP19793 462 aa18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 MNX1P50219 401 aaPredicted RBP18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 MAP3K9P80192 1104 aa18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 ZKSCAN4Q969J2 545 aaPredicted RBP18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 INTS4Q96HW7 963 aaKnown RBP18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 SYNPO2Q9UMS6 1093 aa18.82■□□□□ 0.6
UBE2E1-209ENST00000484048 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 CDC27P30260 824 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 ATP2B2Q01814 1243 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 LRRC47Q8N1G4 583 aaKnown RBP18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 FANCBQ8NB91 859 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 NCOA5Q9HCD5 579 aaKnown RBP18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 ARHGEF10LQ9HCE6 1279 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 FAM217BQ9NTX9 383 aaPredicted RBP18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 LOC285556D6RIA3 1793 aa18.81■□□□□ 0.6
UBE2E1-209ENST00000484048 USP17L5A8MUK1 530 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 ZBTB48P10074 688 aaPredicted RBP18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 PTPRAP18433 802 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 VGLL4Q14135 290 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 GRM4Q14833 912 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 PPP2R5BQ15173 497 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 RTN1Q16799 776 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 NBPF11Q86T75 865 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 CHMP4CQ96CF2 233 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 PICK1Q9NRD5 415 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 TMX2Q9Y320 296 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 SNCAIPQ9Y6H5 919 aa18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 KIAA0100Q14667 2235 aaKnown RBP18.8■□□□□ 0.6
UBE2E1-209ENST00000484048 SNHG28P0DPA3 235 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 SP3Q02447 781 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 CRHR2Q13324 411 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 CCDC84Q86UT8 332 aaPredicted RBP18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 ANKRD13AQ8IZ07 590 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 GMCL1P1Q8NEA9 526 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 ACER1Q8TDN7 264 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 LLPHQ9BRT6 129 aaKnown RBP18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 RBM28Q9NW13 759 aaKnown RBP18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 CSADQ9Y600 493 aa18.79■□□□□ 0.6
UBE2E1-209ENST00000484048 DHX16O60231 1041 aaKnown RBP18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 CTDNEP1O95476 244 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 HSP90AA1P07900 732 aaKnown RBP18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 PDHBP11177 359 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 ADD1P35611 737 aaKnown RBP18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 SLC10A4Q96EP9 437 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 WDR18Q9BV38 432 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 CUL9Q8IWT3 2517 aa18.78■□□□□ 0.6
UBE2E1-209ENST00000484048 CCDC196A0A1B0GTZ2 297 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 UNCXA6NJT0 531 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 KIF5BP33176 963 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 CAP1Q01518 475 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 NTRK3Q16288 839 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 OTUD7BQ6GQQ9 843 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 RASGRP2Q7LDG7 609 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 NSUN7Q8NE18 718 aaKnown RBP18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 FOXD4L1Q9NU39 408 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
UBE2E1-209ENST00000484048 RLFQ13129 1914 aa18.76■□□□□ 0.59
UBE2E1-209ENST00000484048 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
UBE2E1-209ENST00000484048 F5H6K3 240 aa18.76■□□□□ 0.59
UBE2E1-209ENST00000484048 PARP1P09874 1014 aaKnown RBP18.76■□□□□ 0.59
UBE2E1-209ENST00000484048 KLRC3Q07444 240 aa18.76■□□□□ 0.59
UBE2E1-209ENST00000484048 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
UBE2E1-209ENST00000484048 SLFN13Q68D06 897 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms