RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CPLX1O14810 134 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 SNHG28P0DPA3 235 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 PDHBP11177 359 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 ECE1P42892 770 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 SCRN1Q12765 414 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 STK3Q13188 491 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 PPIL2Q13356 520 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 CUL4AQ13619 759 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 GRM4Q14833 912 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 INTS4Q96HW7 963 aaKnown RBP10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 LLPHQ9BRT6 129 aaKnown RBP10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 MYL10Q9BUA6 226 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 ELP3Q9H9T3 547 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 ZHX2Q9Y6X8 837 aa10.51□□□□□ -0.73
SHROOM4-204ENST00000483955 PHIPQ8WWQ0 1821 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 A0A1W2PRG0 241 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 F5H6K3 240 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 UBE2Q2LH0YL09 131 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 WDR46O15213 610 aaKnown RBP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 LARGE1O95461 756 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 NDUFB10O96000 172 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 RXRAP19793 462 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 SLC1A4P43007 532 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 BACE1P56817 501 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 HUNKP57058 714 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 CCT2P78371 535 aaKnown RBP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 HMGN5P82970 282 aaKnown RBP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 KLRC3Q07444 240 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 SPP2Q13103 211 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 MTMR2Q13614 643 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 CCDC96Q2M329 555 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 CST9Q5W186 159 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 SLFN13Q68D06 897 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 USP17L2Q6R6M4 530 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 MOB2Q70IA6 237 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 SIAH1Q8IUQ4 282 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 ACER1Q8TDN7 264 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 OPTNQ96CV9 577 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 C12orf42Q96LP6 360 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 TMOD4Q9NZQ9 345 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 RBM27Q9P2N5 1060 aaKnown RBP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 AFG3L2Q9Y4W6 797 aa10.5□□□□□ -0.73
SHROOM4-204ENST00000483955 TRIM75PA6NK02 468 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 CXCL11O14625 94 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 RAD21O60216 631 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 ZBTB48P10074 688 aaPredicted RBP10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 BMP3P12645 472 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 SMARCA1P28370 1054 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 ZNF543Q08ER8 600 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 ZYXQ15942 572 aaKnown RBP10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 SH3D19Q5HYK7 790 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 TMTC3Q6ZXV5 915 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 RAB11FIP4Q86YS3 637 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 CCDC144CPQ8IYA2 1237 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 HHIPL1Q96JK4 782 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 CLMNQ96JQ2 1002 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 KCNH4Q9UQ05 1017 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 MTMR7Q9Y216 660 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 TLL2Q9Y6L7 1015 aa10.49□□□□□ -0.73
SHROOM4-204ENST00000483955 LOC285556D6RIA3 1793 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 A0A0G2JLL6 359 aaPredicted RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 IFNAR1P17181 557 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 CDC27P30260 824 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 STAT2P52630 851 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 AKAP17AQ02040 695 aaKnown RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 PRRT2Q7Z6L0 340 aaPredicted RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 SAPCD2Q86UD0 394 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 FAM160B2Q86V87 743 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 SPZ1Q9BXG8 430 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 RNF26Q9BY78 433 aaPredicted RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 NCOA5Q9HCD5 579 aaKnown RBP10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 STK36Q9NRP7 1315 aa10.48□□□□□ -0.73
SHROOM4-204ENST00000483955 PTPDC1A2A3K4 754 aa10.47□□□□□ -0.73
SHROOM4-204ENST00000483955 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
SHROOM4-204ENST00000483955 IRF6O14896 467 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms