RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
SRSF6-202ENST00000483871 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
SRSF6-202ENST00000483871 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
SRSF6-202ENST00000483871 NCOA5Q9HCD5 579 aaKnown RBP16.5■□□□□ 0.23
SRSF6-202ENST00000483871 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
SRSF6-202ENST00000483871 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
SRSF6-202ENST00000483871 ISY1Q9ULR0 285 aaKnown RBP16.5■□□□□ 0.23
SRSF6-202ENST00000483871 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
SRSF6-202ENST00000483871 CCL15-CCL14A0A0B4J2E2 113 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 AOC2O75106 756 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 DDAH1O94760 285 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 BMP3P12645 472 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 HSPA6P17066 643 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 ADD1P35611 737 aaKnown RBP16.49■□□□□ 0.23
SRSF6-202ENST00000483871 CCL15Q16663 113 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 CMTR1Q8N1G2 835 aaKnown RBP16.49■□□□□ 0.23
SRSF6-202ENST00000483871 FANCBQ8NB91 859 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 LPAR1Q92633 364 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 GMCL1Q96IK5 515 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 PTPN18Q99952 460 aa16.49■□□□□ 0.23
SRSF6-202ENST00000483871 RPAP3Q9H6T3 665 aaPredicted RBP16.49■□□□□ 0.23
SRSF6-202ENST00000483871 FAM217BQ9NTX9 383 aaPredicted RBP16.49■□□□□ 0.23
SRSF6-202ENST00000483871 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 SLC16A2P36021 539 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 METAP2P50579 478 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRSF6-202ENST00000483871 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 CCDC96Q2M329 555 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 GPAT2Q6NUI2 795 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
SRSF6-202ENST00000483871 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
SRSF6-202ENST00000483871 PALM3A6NDB9 673 aaPredicted RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 TMEM232C9JQI7 657 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 CETPP11597 493 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 VEGFBP49765 207 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 KIF23Q02241 960 aaPredicted RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 SCRN1Q12765 414 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 GRM4Q14833 912 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 TMX3Q96JJ7 454 aa16.47■□□□□ 0.23
SRSF6-202ENST00000483871 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
SRSF6-202ENST00000483871 BTBD19C9JJ37 291 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 WDR46O15213 610 aaKnown RBP16.46■□□□□ 0.23
SRSF6-202ENST00000483871 PLEKHA8P1O95397 391 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 CALM1P0DP23 149 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 CALM2P0DP24 149 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 CALM3P0DP25 149 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 RTN1Q16799 776 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 RBM19Q9Y4C8 960 aaKnown RBP16.46■□□□□ 0.23
SRSF6-202ENST00000483871 CEP350Q5VT06 3117 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
SRSF6-202ENST00000483871 WDR33Q9C0J8 1336 aaKnown RBP16.46■□□□□ 0.23
SRSF6-202ENST00000483871 TESPA1A2RU30 521 aaPredicted RBP16.46■□□□□ 0.23
SRSF6-202ENST00000483871 MANSC4A6NHS7 340 aaPredicted RBP16.46■□□□□ 0.23
SRSF6-202ENST00000483871 KLRF2D3W0D1 207 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 PFKFB2O60825 505 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 SLC35G1Q2M3R5 365 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 CATSPERGQ6ZRH7 1159 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 FAM43AQ8N2R8 423 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 SNX21Q969T3 373 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 MAP3K14Q99558 947 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
SRSF6-202ENST00000483871 IGF2BP3O00425 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
SRSF6-202ENST00000483871 MCM2P49736 904 aa16.45■□□□□ 0.22
SRSF6-202ENST00000483871 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
SRSF6-202ENST00000483871 NOGQ13253 232 aa16.45■□□□□ 0.22
SRSF6-202ENST00000483871 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
SRSF6-202ENST00000483871 GPATCH4Q5T3I0 446 aaKnown RBP16.45■□□□□ 0.22
SRSF6-202ENST00000483871 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
SRSF6-202ENST00000483871 SRBD1Q8N5C6 995 aaKnown RBP16.45■□□□□ 0.22
SRSF6-202ENST00000483871 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
SRSF6-202ENST00000483871 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
SRSF6-202ENST00000483871 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 CYTH3O43739 400 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 FLOT1O75955 427 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
SRSF6-202ENST00000483871 KIF5BP33176 963 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 RCAN1P53805 252 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
SRSF6-202ENST00000483871 PDHXO00330 501 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 STAT2P52630 851 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms