RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 LUZP1Q86V48 1076 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 LRRC47Q8N1G4 583 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 SERPINA10Q9UK55 444 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 HPSEQ9Y251 543 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 TOP1P11387 765 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 HDLBPQ00341 1268 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 CFAP100Q494V2 611 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 WWC2Q6AWC2 1192 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 USP49Q70CQ1 688 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 LARGE2Q8N3Y3 721 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 PSMD1Q99460 953 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 IDI2Q9BXS1 227 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 UBA5Q9GZZ9 404 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 DNAJC25Q9H1X3 360 aa10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 FBXO2Q9UK22 296 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-204ENST00000483763 PSMD14O00487 310 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 PDHBP11177 359 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 NLRP5P59047 1200 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 RASGRP4Q8TDF6 673 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 ARID3AQ99856 593 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 SDF4Q9BRK5 362 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 CLIP2Q9UDT6 1046 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 FRMPD2Q68DX3 1309 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 PLIN4Q96Q06 1357 aa10.15□□□□□ -0.78
CDC42SE1-204ENST00000483763 GRIN3BO60391 1043 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 PARP1P09874 1014 aaKnown RBP10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 PTPREP23469 700 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 C9orf131Q5VYM1 1079 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 RESP18Q5W5W9 173 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 PIK3AP1Q6ZUJ8 805 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 C11orf57Q6ZUT1 292 aaPredicted RBP10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 FAM43AQ8N2R8 423 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 CNKSR2Q8WXI2 1034 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 GMLQ99445 158 aa10.15□□□□□ -0.79
CDC42SE1-204ENST00000483763 M0R2N6 131 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 JAG1P78504 1218 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 SASS6Q6UVJ0 657 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 HEATR3Q7Z4Q2 680 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 HOMER1Q86YM7 354 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZSCAN29Q8IWY8 852 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 FAM200AQ8TCP9 573 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 CBX8Q9HC52 389 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 VAT1LQ9HCJ6 419 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 RRAGDQ9NQL2 400 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 PI4KBQ9UBF8 816 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 SWAP70Q9UH65 585 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 BRCA1P38398 1863 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 FAM237AA0A1B0GTK4 181 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 STXBP3O00186 592 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 MPHOSPH10O00566 681 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 HLA-DOAP06340 250 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 VIL1P09327 827 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 SYKP43405 635 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 GNAQP50148 359 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZNF174Q15697 407 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 UVSSAQ2YD98 709 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 SIAH1Q8IUQ4 282 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 JMYQ8N9B5 988 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 EHD4Q9H223 541 aa10.14□□□□□ -0.79
CDC42SE1-204ENST00000483763 CLRN2A0PK11 232 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 TRIM75PA6NK02 468 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 NFKBIEO00221 500 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 CTAGE5O15320 804 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 SIPA1L1O43166 1804 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 CUTAO60888 179 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 TTLL1O95922 423 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 SNHG28P0DPA3 235 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 ZNF165P49910 485 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 RRP1BQ14684 758 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 FOXP4Q8IVH2 680 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 PIGSQ96S52 555 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 SPZ1Q9BXG8 430 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 CSRNP2Q9H175 543 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 DHX36Q9H2U1 1008 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 BARHL2Q9NY43 387 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 KCNH3Q9ULD8 1083 aa10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 SRPRBQ9Y5M8 271 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-204ENST00000483763 SHTN1A0MZ66 631 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 FOXN1O15353 648 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 ADCY5O95622 1261 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 ATP2B2Q01814 1243 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 TTBK2Q6IQ55 1244 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 CDAN1Q8IWY9 1227 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 BLIDQ8IZY5 108 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 PCDHA4Q9UN74 947 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 MYO3BQ8WXR4 1341 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 BIN1O00499 593 aa10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 CDK11BP21127 795 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-204ENST00000483763 CXCL9Q07325 125 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms