RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 FAM83BQ5T0W9 1011 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
RPP40-206ENST00000483546 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 MCOLN1Q9GZU1 580 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 ADAMTS5Q9UNA0 930 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 ZSWIM8A7E2V4 1837 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 SLC27A2O14975 620 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 PLA2G6O60733 806 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
RPP40-206ENST00000483546 FDX1P10109 184 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 BMP3P12645 472 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 SLC1A4P43007 532 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
RPP40-206ENST00000483546 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 MTA3Q9BTC8 594 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 PPP1R9AQ9ULJ8 1098 aa18.35■□□□□ 0.53
RPP40-206ENST00000483546 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
RPP40-206ENST00000483546 TNPO2O14787 897 aaKnown RBP18.34■□□□□ 0.53
RPP40-206ENST00000483546 MAPK4P31152 587 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 SART3Q15020 963 aaKnown RBP18.34■□□□□ 0.53
RPP40-206ENST00000483546 FAM160B2Q86V87 743 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 CHURC1Q8WUH1 139 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 COA7Q96BR5 231 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 PTPN22Q9Y2R2 807 aa18.34■□□□□ 0.53
RPP40-206ENST00000483546 DOCK3Q8IZD9 2030 aa18.33■□□□□ 0.53
RPP40-206ENST00000483546 TNKSO95271 1327 aa18.33■□□□□ 0.53
RPP40-206ENST00000483546 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.52
RPP40-206ENST00000483546 STAT2P52630 851 aa18.33■□□□□ 0.52
RPP40-206ENST00000483546 TSGA10IPQ3SY00 556 aa18.33■□□□□ 0.52
RPP40-206ENST00000483546 CCAR1Q8IX12 1150 aaKnown RBP18.33■□□□□ 0.52
RPP40-206ENST00000483546 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
RPP40-206ENST00000483546 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
RPP40-206ENST00000483546 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
RPP40-206ENST00000483546 ERICH2A1L162 156 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 CNMDO75829 334 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 MCCP23508 829 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 CTGFP29279 349 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 COPB2P35606 906 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 KRT32Q14532 448 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 POTEEQ6S8J3 1075 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 ATG4CQ96DT6 458 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 NUP88Q99567 741 aaPredicted RBP18.32■□□□□ 0.52
RPP40-206ENST00000483546 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 KAT14Q9H8E8 782 aa18.32■□□□□ 0.52
RPP40-206ENST00000483546 VWA5AO00534 786 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 SNHG28P0DPA3 235 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 CAP1Q01518 475 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 IFIT1BQ5T764 474 aaKnown RBP18.31■□□□□ 0.52
RPP40-206ENST00000483546 CYB5R4Q7L1T6 521 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
RPP40-206ENST00000483546 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 BTBD7Q9P203 1132 aa18.31■□□□□ 0.52
RPP40-206ENST00000483546 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 ATP2A1O14983 1001 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 SLC25A27O95847 323 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 PDHBP11177 359 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 MCM5P33992 734 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 OAZ1P54368 228 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 IRF5Q13568 498 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 SEC23AQ15436 765 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 Q3C1V9 767 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
RPP40-206ENST00000483546 MROH8Q9H579 483 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 TAF6LQ9Y6J9 622 aa18.3■□□□□ 0.52
RPP40-206ENST00000483546 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 IFIT3O14879 490 aaKnown RBP18.29■□□□□ 0.52
RPP40-206ENST00000483546 ZBED4O75132 1171 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 HSPA4P34932 840 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 KCNB2Q92953 911 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 TMEM87BQ96K49 555 aa18.29■□□□□ 0.52
RPP40-206ENST00000483546 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
RPP40-206ENST00000483546 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
RPP40-206ENST00000483546 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
RPP40-206ENST00000483546 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 STRNO43815 780 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
RPP40-206ENST00000483546 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 IKQ13123 557 aaPredicted RBP18.28■□□□□ 0.52
RPP40-206ENST00000483546 TMEM132BQ14DG7 1078 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 WTAPQ15007 396 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 PLEKHH3Q7Z736 793 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms