RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
VARS-225ENST00000482996 CAPN2P17655 700 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 PTPREP23469 700 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 PDE4AP27815 886 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 GJA8P48165 433 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 MAP2K5Q13163 448 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 PLS1Q14651 629 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 USP6NLQ92738 828 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 MKL1Q969V6 931 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 APBA2Q99767 749 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 MOV10L1Q9BXT6 1211 aaKnown RBP16.46■□□□□ 0.23
VARS-225ENST00000482996 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 BRCA2P51587 3418 aa16.45■□□□□ 0.22
VARS-225ENST00000482996 RANBP6O60518 1105 aaKnown RBP16.45■□□□□ 0.22
VARS-225ENST00000482996 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
VARS-225ENST00000482996 U2AF1L4Q8WU68 220 aaKnown RBP16.45■□□□□ 0.22
VARS-225ENST00000482996 TOMM22Q9NS69 142 aa16.45■□□□□ 0.22
VARS-225ENST00000482996 FBXO28Q9NVF7 368 aa16.45■□□□□ 0.22
VARS-225ENST00000482996 STRNO43815 780 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 ORC4O43929 436 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 ERCC3P19447 782 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 GRB14Q14449 540 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
VARS-225ENST00000482996 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 TRIB2Q92519 343 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 SHISA4Q96DD7 197 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
VARS-225ENST00000482996 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.44■□□□□ 0.229e-6■■□□□ 12
VARS-225ENST00000482996 MROH8Q9H579 483 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
VARS-225ENST00000482996 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
VARS-225ENST00000482996 RLFQ13129 1914 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 PLXNB2O15031 1838 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 VWA5AO00534 786 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 SGPL1O95470 568 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 SLC25A27O95847 323 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 COPB2P35606 906 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 TMEM132BQ14DG7 1078 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
VARS-225ENST00000482996 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 DEFB118Q96PH6 123 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 INCENPQ9NQS7 918 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 PAK6Q9NQU5 681 aaPredicted RBP16.43■□□□□ 0.22
VARS-225ENST00000482996 ADAMTS5Q9UNA0 930 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 STX8Q9UNK0 236 aa16.43■□□□□ 0.22
VARS-225ENST00000482996 CTDP1Q9Y5B0 961 aaPredicted RBP16.43■□□□□ 0.22
VARS-225ENST00000482996 MKI67P46013 3256 aaKnown RBP16.43■□□□□ 0.22
VARS-225ENST00000482996 TFRCP02786 760 aaKnown RBP16.42■□□□□ 0.22
VARS-225ENST00000482996 HOXC6P09630 235 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 FGRP09769 529 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
VARS-225ENST00000482996 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
VARS-225ENST00000482996 HAND2P61296 217 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 TRIM32Q13049 653 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 MFSD14CQ5VZR4 134 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
VARS-225ENST00000482996 RNF41Q9H4P4 317 aaPredicted RBP16.42■□□□□ 0.22
VARS-225ENST00000482996 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 FEM1BQ9UK73 627 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
VARS-225ENST00000482996 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
VARS-225ENST00000482996 ZBED4O75132 1171 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 BMP3P12645 472 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
VARS-225ENST00000482996 ADORA2AP29274 412 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 STAT3P40763 770 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 CCL14Q16627 93 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 AKNAD1Q5T1N1 836 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 MAP3K21Q5TCX8 1036 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 PRPF38BQ5VTL8 546 aaKnown RBP16.41■□□□□ 0.22
VARS-225ENST00000482996 MFSD6Q6ZSS7 791 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 RIOX2Q8IUF8 465 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
VARS-225ENST00000482996 ZNF213O14771 459 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 FARP2O94887 1054 aaPredicted RBP16.4■□□□□ 0.22
VARS-225ENST00000482996 FCER1AP12319 257 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 STAG1Q8WVM7 1258 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 KIFC2Q96AC6 838 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 GMCL1Q96IK5 515 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 IL17RBQ9NRM6 502 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 TACC3Q9Y6A5 838 aa16.4■□□□□ 0.22
VARS-225ENST00000482996 NMT2O60551 498 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 FDX1P10109 184 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 SLC1A4P43007 532 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 NT5C2P49902 561 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 CACNB2Q08289 660 aaPredicted RBP16.39■□□□□ 0.21
VARS-225ENST00000482996 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
VARS-225ENST00000482996 REPS2Q8NFH8 660 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 CHURC1Q8WUH1 139 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 TEX13BQ9BXU2 312 aa16.39■□□□□ 0.21
VARS-225ENST00000482996 CRISPLD2Q9H0B8 497 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms