RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 KAT2BQ92831 832 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 C4BP0C0L5 1744 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 AKAP11Q9UKA4 1901 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 MINDY4BA8MYZ0 360 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 MFAP3LO75121 409 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 CASP14P31944 242 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 MYH3P11055 1940 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 MYH7P12883 1935 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 TUBBP07437 444 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 SLC5A1P13866 664 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 CD44P16070 742 aaKnown RBP16.11■□□□□ 0.17
COL9A2-207ENST00000482722 KLRK1P26718 216 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 ARID4AP29374 1257 aaPredicted RBP16.11■□□□□ 0.17
COL9A2-207ENST00000482722 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
COL9A2-207ENST00000482722 CHRNDQ07001 517 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 NT5DC1Q5TFE4 455 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 VIPAS39Q9H9C1 493 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 ABCF2Q9UG63 623 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 HPCAL4Q9UM19 191 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 CDC25AP30304 524 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 LIG3P49916 1009 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 WTAPQ15007 396 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 RTN1Q16799 776 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 TRIM22Q8IYM9 498 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 MYO6Q9UM54 1294 aa16.11■□□□□ 0.17
COL9A2-207ENST00000482722 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
COL9A2-207ENST00000482722 ERICH2A1L162 156 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 HSPA1LP34931 641 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 PBX1P40424 430 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 ARHGAP25P42331 645 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 FXR1P51114 621 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL9A2-207ENST00000482722 PLCD1P51178 756 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 AMPD2Q01433 879 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 VPS72Q15906 364 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
COL9A2-207ENST00000482722 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
COL9A2-207ENST00000482722 MYH8P13535 1937 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 PTPREP23469 700 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 SWT1Q5T5J6 900 aaKnown RBP16.1■□□□□ 0.17
COL9A2-207ENST00000482722 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 SMARCC1Q92922 1105 aaPredicted RBP16.1■□□□□ 0.17
COL9A2-207ENST00000482722 EPSTI1Q96J88 318 aa16.1■□□□□ 0.17
COL9A2-207ENST00000482722 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
COL9A2-207ENST00000482722 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 ERLIN2O94905 339 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 ERVK-24P63145 666 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 SGMS1Q86VZ5 419 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 ELOA2Q8IYF1 753 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 SECISBP2LQ93073 1101 aaKnown RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 CABP5Q9NP86 173 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 FMNL1O95466 1100 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 GYPCP04921 128 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 IGHMBP2P38935 993 aaKnown RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 CCT5P48643 541 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 ZNF512BQ96KM6 892 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 ADD3Q9UEY8 706 aaKnown RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 A0A087X0B3 334 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 ACTN4O43707 911 aaKnown RBP16.09■□□□□ 0.17
COL9A2-207ENST00000482722 MMP1P03956 469 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 USP14P54578 494 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
COL9A2-207ENST00000482722 FGFR2P21802 821 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 GGCXP38435 758 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 LIFRP42702 1097 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 SLC4A8Q2Y0W8 1093 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 CCDC91Q7Z6B0 441 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 CEP89Q96ST8 783 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 KRT23Q9C075 422 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 KAT14Q9H8E8 782 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 ATRNO75882 1429 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 RNF225M0QZC1 329 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-207ENST00000482722 ZMYND10O75800 440 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 ERCC5P28715 1186 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-207ENST00000482722 MMP14P50281 582 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 STIM1Q13586 685 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 UBAC1Q9BSL1 405 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 RABEP2Q9H5N1 569 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.16
COL9A2-207ENST00000482722 IFNAR1P17181 557 aa16.07■□□□□ 0.16
COL9A2-207ENST00000482722 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
COL9A2-207ENST00000482722 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
COL9A2-207ENST00000482722 TRIML1Q8N9V2 468 aa16.07■□□□□ 0.16
COL9A2-207ENST00000482722 COG1Q8WTW3 980 aa16.07■□□□□ 0.16
COL9A2-207ENST00000482722 WASF1Q92558 559 aa16.07■□□□□ 0.16
COL9A2-207ENST00000482722 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms