RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 DESI2Q9BSY9 194 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 TUBB2BQ9BVA1 445 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 LIMA1Q9UHB6 759 aaKnown RBP17.38■□□□□ 0.37
C9orf3-218ENST00000482056 KIAA1551Q9HCM1 1747 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 XDHP47989 1333 aa17.38■□□□□ 0.37
C9orf3-218ENST00000482056 SOWAHDA6NJG2 315 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 NMT2O60551 498 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 GNAQP50148 359 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 PDXDC2PQ6P474 469 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 DZIP1Q86YF9 867 aaKnown RBP17.37■□□□□ 0.37
C9orf3-218ENST00000482056 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-218ENST00000482056 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 CPLX3Q8WVH0 158 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 GOLGA1Q92805 767 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 ADGRG1Q9Y653 693 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 N4BP3O15049 544 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 PNMA6AP0CW24 399 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-218ENST00000482056 TERF2Q15554 542 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
C9orf3-218ENST00000482056 ZNF658Q5TYW1 1059 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-218ENST00000482056 JAKMIP3Q5VZ66 844 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 TTF2Q9UNY4 1162 aaKnown RBP17.37■□□□□ 0.37
C9orf3-218ENST00000482056 FHOD1Q9Y613 1164 aa17.37■□□□□ 0.37
C9orf3-218ENST00000482056 ZBTB22O15209 634 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 DGKHQ86XP1 1220 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 TMTC1Q8IUR5 882 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 RABGGTAQ92696 567 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 BLZF1Q9H2G9 400 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 MCM9Q9NXL9 1143 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
C9orf3-218ENST00000482056 ZRANB2O95218 330 aaKnown RBP eCLIP17.35■□□□□ 0.37
C9orf3-218ENST00000482056 CASP14P31944 242 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 STAT6P42226 847 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 TUBB4BP68371 445 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 KRT31Q15323 416 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 TEX35Q5T0J7 233 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 TBC1D9BQ66K14 1250 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 RASGRP2Q7LDG7 609 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-218ENST00000482056 CCDC148Q8NFR7 591 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 MRPL44Q9H9J2 332 aaKnown RBP17.35■□□□□ 0.37
C9orf3-218ENST00000482056 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 LRRC10BA6NIK2 292 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 RPN1P04843 607 aaKnown RBP17.35■□□□□ 0.37
C9orf3-218ENST00000482056 CYP2D6P10635 497 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 PRDX5P30044 214 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 MTF1Q14872 753 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 GALNT17Q6IS24 598 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 RAD9BQ6WBX8 426 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 NELFBQ8WX92 580 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 STAMQ92783 540 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 LZTFL1Q9NQ48 299 aa17.35■□□□□ 0.37
C9orf3-218ENST00000482056 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 KCNQ2O43526 872 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 FECHP22830 423 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 KLRK1P26718 216 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 CCT6AP40227 531 aaKnown RBP17.34■□□□□ 0.37
C9orf3-218ENST00000482056 COPB1P53618 953 aaKnown RBP17.34■□□□□ 0.37
C9orf3-218ENST00000482056 WWC2Q6AWC2 1192 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 RSRC2Q7L4I2 434 aaKnown RBP17.34■□□□□ 0.37
C9orf3-218ENST00000482056 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 ANKS1AQ92625 1134 aa17.34■□□□□ 0.37
C9orf3-218ENST00000482056 KCNJ18B7U540 433 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 H7C1D1 291 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 GYPCP04921 128 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 MYL1P05976 194 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 USP5P45974 858 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 GSTO1P78417 241 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 TFAP4Q01664 338 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 STIM1Q13586 685 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 KCNJ12Q14500 433 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 TCP11X2Q5H9J9 407 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 CYP26C1Q6V0L0 522 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 TPTE2Q6XPS3 522 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 DTHD1Q6ZMT9 781 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 CEP112Q8N8E3 955 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 RASSF8Q8NHQ8 419 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 NARFQ9UHQ1 456 aa17.33■□□□□ 0.37
C9orf3-218ENST00000482056 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.37
C9orf3-218ENST00000482056 POTEB2H3BUK9 544 aa17.33■□□□□ 0.36
C9orf3-218ENST00000482056 GRM4Q14833 912 aa17.33■□□□□ 0.36
C9orf3-218ENST00000482056 IL17AQ16552 155 aa17.33■□□□□ 0.36
C9orf3-218ENST00000482056 WDR66Q8TBY9 1149 aa17.33■□□□□ 0.36
C9orf3-218ENST00000482056 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-218ENST00000482056 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
C9orf3-218ENST00000482056 COL24A1Q17RW2 1714 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 LAD1O00515 517 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 ZPR1O75312 459 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 RC3H1Q5TC82 1133 aaKnown RBP17.32■□□□□ 0.36
C9orf3-218ENST00000482056 C12orf60Q5U649 245 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 VPS16Q9H269 839 aa17.32■□□□□ 0.36
C9orf3-218ENST00000482056 ARFGAP3Q9NP61 516 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms