RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-224ENST00000481929 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 ZNF512BQ96KM6 892 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-224ENST00000481929 MMP19Q99542 508 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 MROH7Q68CQ1 1323 aa18.21■□□□□ 0.51
HDAC6-224ENST00000481929 ADAMTS4O75173 837 aa18.2■□□□□ 0.5
HDAC6-224ENST00000481929 SLC25A27O95847 323 aa18.2■□□□□ 0.5
HDAC6-224ENST00000481929 TAL1P17542 331 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-224ENST00000481929 PLCD1P51178 756 aa18.2■□□□□ 0.5
HDAC6-224ENST00000481929 PSRC1Q6PGN9 363 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-224ENST00000481929 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
HDAC6-224ENST00000481929 CHD9Q3L8U1 2897 aa18.2■□□□□ 0.5
HDAC6-224ENST00000481929 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 MOXD2PA6NHM9 499 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 GNAI2P04899 355 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 POLR3DP05423 398 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-224ENST00000481929 PGK2P07205 417 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 CT47B1P0C2W7 299 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-224ENST00000481929 KCTD2Q14681 263 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-224ENST00000481929 C16orf59Q7L2K0 433 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 TMEM199Q8N511 208 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
HDAC6-224ENST00000481929 CXXC1Q9P0U4 656 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-224ENST00000481929 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
HDAC6-224ENST00000481929 ZNFX1Q9P2E3 1918 aaKnown RBP18.18■□□□□ 0.5
HDAC6-224ENST00000481929 APBB1O00213 710 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 ZNF865P0CJ78 1059 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-224ENST00000481929 CSF2RAP15509 400 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 OS9Q13438 667 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-224ENST00000481929 KIAA1755Q5JYT7 1200 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 ZNF365Q70YC5 407 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 NECAB3Q96P71 396 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-224ENST00000481929 HCN4Q9Y3Q4 1203 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 SYNRGQ9UMZ2 1314 aa18.18■□□□□ 0.5
HDAC6-224ENST00000481929 ACRP10323 421 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 GABPAQ06546 454 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 KCNA10Q16322 511 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 ZNF792Q3KQV3 632 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 SPICE1Q8N0Z3 855 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 GLT1D1Q96MS3 346 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 MTIF3Q9H2K0 278 aaKnown RBP18.17■□□□□ 0.5
HDAC6-224ENST00000481929 NKX2-4Q9H2Z4 354 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 ARIH1Q9Y4X5 557 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-224ENST00000481929 ELP1O95163 1332 aa18.17■□□□□ 0.5
HDAC6-224ENST00000481929 AAK1Q2M2I8 961 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 TMEM179Q6ZVK1 233 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 RIOX2Q8IUF8 465 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 KLHDC9Q8NEP7 349 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 PPP1R12CQ9BZL4 782 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 ARHGEF10LQ9HCE6 1279 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 FAM184BQ9ULE4 1060 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 SYNGAP1Q96PV0 1343 aa18.16■□□□□ 0.5
HDAC6-224ENST00000481929 BMP1P13497 986 aa18.15■□□□□ 0.5
HDAC6-224ENST00000481929 CCSAPQ6IQ19 270 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-224ENST00000481929 TMED8Q6PL24 325 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-224ENST00000481929 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
HDAC6-224ENST00000481929 ARHGAP45Q92619 1136 aa18.15■□□□□ 0.5
HDAC6-224ENST00000481929 VTI1AQ96AJ9 217 aa18.15■□□□□ 0.5
HDAC6-224ENST00000481929 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
HDAC6-224ENST00000481929 PIEZO1Q92508 2521 aa18.15■□□□□ 0.5
HDAC6-224ENST00000481929 TCF20Q9UGU0 1960 aaKnown RBP18.15■□□□□ 0.5
HDAC6-224ENST00000481929 NAV1Q8NEY1 1877 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
HDAC6-224ENST00000481929 TLR3O15455 904 aaKnown RBP18.14■□□□□ 0.49
HDAC6-224ENST00000481929 COPB2P35606 906 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 CDK7P50613 346 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 HERVK_113Q902F9 699 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 MCM9Q9NXL9 1143 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 ZHX1Q9UKY1 873 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-224ENST00000481929 TMX2Q9Y320 296 aa18.14■□□□□ 0.49
HDAC6-224ENST00000481929 A0A0U1RQG5 324 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 MYADML2A6NDP7 307 aa18.13■□□□□ 0.49
HDAC6-224ENST00000481929 CST5P28325 142 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 ICA1Q05084 483 aa18.13■□□□□ 0.49
HDAC6-224ENST00000481929 MSL3Q8N5Y2 521 aaKnown RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 PCSK9Q8NBP7 692 aaKnown RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 RIOK1Q9BRS2 568 aaKnown RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 CRNKL1Q9BZJ0 848 aaKnown RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 SPC25Q9HBM1 224 aa18.13■□□□□ 0.49
HDAC6-224ENST00000481929 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 YBX2Q9Y2T7 364 aaKnown RBP18.13■□□□□ 0.49
HDAC6-224ENST00000481929 ARVCFO00192 962 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 DUSP11O75319 330 aaKnown RBP18.12■□□□□ 0.49
HDAC6-224ENST00000481929 C6orf222P0C671 652 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-224ENST00000481929 STAT3P40763 770 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 TFF2Q03403 129 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 EVX2Q03828 476 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 SKIV2LQ15477 1246 aaKnown RBP18.12■□□□□ 0.49
HDAC6-224ENST00000481929 CLEC10AQ8IUN9 316 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 LRFN3Q9BTN0 628 aa18.12■□□□□ 0.49
HDAC6-224ENST00000481929 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
HDAC6-224ENST00000481929 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms